Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3529g00002 ATGGATTGTTCCTCCATCTTCCACTCTTCAAACTCCTCGTTCTCTCATCACCACCTACCTTTCAACGATCCGGAGGAGATGCTCCTCTACGGCATGATCACATCACACCAAGAGGGAGTTCACCCATGCAGAGTTGTTAAGGAAGAGGAGGTGAGTTTCGAGGAAAACAACAACAGTAACAACAATATTAACAATAACAATAATAAAAATTTTCGTGGTGTGCGAAGGAGGCCATGGGGAAAGTTTGCGGCAGAGATAAGAGACTCCACCCGTCACGGCATAAGGGTTTGGCTTGGGACATTCGACAGTGCCGAAGCGGCGGCGCTGGCGTATGACCAAGCCGCGTTTGCCATGAGGGGTTCCTCCGCCGTGCTCAACTTTCCCGTGGAGAAGGTGAAGGAGTCCCTTAGGGACATGAACTGTTCTCTCTCCCAGCTCGATGGGTCTTCTCCCGTTGTGGCTTTGAAGAGGAAACACTCCTTGGGACGGAAAATGGCTGCTAAGAAGAAGAAGGAAGAGAGTGATGATGTTAGGTTAGAGAATGTGGTTGTGTTTGAAGACTTGGGGGAAGAGTATTTGGAACAGTTGTTGATGTCTTCCGATGATACTCGTTTTATATAA 621 0.4831 MDCSSIFHSSNSSFSHHHLPFNDPEEMLLYGMITSHQEGVHPCRVVKEEEVSFEENNNSNNNINNNNNKNFRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAEAAALAYDQAAFAMRGSSAVLNFPVEKVKESLRDMNCSLSQLDGSSPVVALKRKHSLGRKMAAKKKKEESDDVRLENVVVFEDLGEEYLEQLLMSSDDTRFI 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3529g00002 206 ProSiteProfiles AP2/ERF domain profile. 70 128 IPR001471 GO:0003700|GO:0006355
Mupr3529g00002 206 Gene3D AP2/ERF domain 69 130 IPR036955 GO:0003700|GO:0006355
Mupr3529g00002 206 FunFam Ethylene-responsive transcription factor 2 69 130 - -
Mupr3529g00002 206 SUPERFAMILY DNA-binding domain 70 130 IPR016177 GO:0003677
Mupr3529g00002 206 PANTHER DNA-BINDING DOMAIN 55 198 IPR044808 GO:0003700|GO:0009873
Mupr3529g00002 206 Pfam AP2 domain 70 120 IPR001471 GO:0003700|GO:0006355
Mupr3529g00002 206 SMART rav1_2 70 134 IPR001471 GO:0003700|GO:0006355
Mupr3529g00002 206 CDD AP2 71 129 IPR001471 GO:0003700|GO:0006355
Mupr3529g00002 206 PRINTS Ethylene responsive element binding protein signature 110 130 IPR001471 GO:0003700|GO:0006355
Mupr3529g00002 206 PRINTS Ethylene responsive element binding protein signature 71 82 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3529g00002 Mupr-Chr3529 11205 12424 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3529g00002 19 203 AP2-EREBP Transcription Factor Family AT3G23240 55.051 2.08e-66 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mupr3529g00002 AP2 1.4e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3529g00002 K14516 - gmx:100780576 254.988