Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3498g00001 ATGGAAGGAGCATCGTGGAATAGTGTTTGTGTAGCACCGTTTCTGAGTAAGACCTACGACATGGTAGATGACCCTTCCACCGACTCGGTCGTGTCGTGGGGGAATCAAAACAACACCTTTGTTGTCTGGAACGTTCCCCAATTCGCCACAGACATCTTACCTAAGCATTTCAAGCACAATAACTTCTCCAGCTTCGTCAGGCAATTGAATACTTATGGTTTTAGAAAGGTTGACCCAGATCGATGGGAATTTGCAAATGAAGGATTTTTAAGAGGTGAAAAACAACTGTTAAAAAGTATCAGTAGGCGGAAATCTGCTCATGTAAATGGTAGTCAACAATCATCTCAAGTGCATAACTCAACTGTCAGAGCATGTGTTGAAGTGGGGAAATTTGGGCTTGAGGAAGAGGTGGAAAGGCTGAAAAGGGATAAGAATGTTCTTATGCAGGAACTTGTTAGGTTGAGACAGAAACAGCAAGCGACTGATAAACAATTGCAAAATGTTGGGCAAAGTTTGCAGTCAATGGAGCAGCGTCAGCAGCAAATGATGTCATTCCTGGCAAAGGCCATGCAGAGCCCAGGCTTCTTAGCTCAATTTGTACAGCAGCAGAACGAAAGTAATAGACATATCACTGGAGGCAATAAAAAGAGGAGGCTCCACAGGCAAGAGGAAGATAGTTTAGCGCCCAAGGATCCCCATAATGCTCTTGATGGACATGTTGTCAAGTACCAAAGTTCCATAAACGAGGCCACAAAAGCATTATTTCGCCAGTTATTGCAAGTAAACAATTCTACAACAACAGAATCATCAATTAAGAACCCTGATGTTTTCCTTATTGACGATGTTCCTTCTGCCATTGCAGTAGATAGCAGTAGTTCATCCCCTCAGGTTTCTAATGTGACCCTTTCTATGGTTCCACCTATTTCTGAGCTAACATGTATGGATGTTGAATCACAGTTTCCTGTCAATTGTATGCCCAGTAGCATATCTGAGGTGCAGTCTTCACCTTCTGTTTTGGGTTTTTGTAAGAGTCAAGGGATGGAGACAGAAAGCAGTTTAGTGAATCATGATCGGAATGTTGTGGGGGCTGATACTAGGAACACGGGGGAGATAGATATGATGTCAACTGTTTTAGATGGGGCACACACTGTAGAAGCTGATCATTTTTCACCTGAAGCAGATGAAATTTCTAAACTCCCAGGAATCAATGATGAATTCTGGGAACTGTTTTTCAGGCCAAGCCCAGTTGCAGAAGACACAGAGGAAACCAAATGTGATTTGACTGAAGATCAGGGTTTGCCTTCAGAACAGGAAAATAAGCAGGAAAAAATTGATAAGATACAGCATGTTGACCATCTTACTCAACAGATGGGACTTCTTGCATCGGAGTCCTAA 1395 0.4258 MEGASWNSVCVAPFLSKTYDMVDDPSTDSVVSWGNQNNTFVVWNVPQFATDILPKHFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGEKQLLKSISRRKSAHVNGSQQSSQVHNSTVRACVEVGKFGLEEEVERLKRDKNVLMQELVRLRQKQQATDKQLQNVGQSLQSMEQRQQQMMSFLAKAMQSPGFLAQFVQQQNESNRHITGGNKKRRLHRQEEDSLAPKDPHNALDGHVVKYQSSINEATKALFRQLLQVNNSTTTESSIKNPDVFLIDDVPSAIAVDSSSSSPQVSNVTLSMVPPISELTCMDVESQFPVNCMPSSISEVQSSPSVLGFCKSQGMETESSLVNHDRNVVGADTRNTGEIDMMSTVLDGAHTVEADHFSPEADEISKLPGINDEFWELFFRPSPVAEDTEETKCDLTEDQGLPSEQENKQEKIDKIQHVDHLTQQMGLLASES 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3498g00001 464 MobiDBLite consensus disorder prediction 204 236 - -
Mupr3498g00001 464 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 7 294 IPR027725 -
Mupr3498g00001 464 Coils Coil 130 157 - -
Mupr3498g00001 464 SMART hsfneu3 10 103 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mupr3498g00001 464 FunFam Heat shock transcription factor 1 7 104 - -
Mupr3498g00001 464 Pfam HSF-type DNA-binding 14 103 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mupr3498g00001 464 PRINTS Heat shock factor (HSF) domain signature 14 37 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mupr3498g00001 464 PRINTS Heat shock factor (HSF) domain signature 65 77 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mupr3498g00001 464 PRINTS Heat shock factor (HSF) domain signature 52 64 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mupr3498g00001 464 ProSitePatterns HSF-type DNA-binding domain signature. 53 77 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mupr3498g00001 464 MobiDBLite consensus disorder prediction 217 236 - -
Mupr3498g00001 464 SUPERFAMILY "Winged helix" DNA-binding domain 11 103 IPR036390 -
Mupr3498g00001 464 Gene3D - 7 104 IPR036388 -
Mupr3498g00001 464 MobiDBLite consensus disorder prediction 418 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3498g00001 Mupr-Chr3498 174 3005 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3498g00001 11 464 HSF AT5G16820 53.664 1.10e-146 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mupr3498g00001 HSF_DNA-bind 2.3e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3498g00001 K09419 - gmx:100793665 733.021