Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3496g00005 ATGGGAGACGACGACGAGGAGGAGGTGGTGGGTTGTGCGACCACCGTTTCGGGCCAATCAGCCTCCACTAACAGCTTGCCACCACCCGCCGATAACACACTCCTCAAATTAAACCATCTTGACATACATGCTGATGATGCTGGATCACACGCGTCTGTTGCGTCAGTCCTCTCCACTAATCTCTTTTTCTTCGTATCATCCACAATGCTGTTTCATTTTCTTTCTTTGATTTTCAATTTTCTCAAAATTAAATTGATTCTCACCAGCACTGGCAAGAAGAAAAAGAGAGGCCAACGTGCTGTTGGACCTGATAAGAGTGGAAGAGGTCTCCGCCAATTTAGTATGAAAGTGTGTGAGAAGGTAGAAAGCAGGGGAAGAACAACTTACAATGAGGTGGCGGATGAGCTTGTTGCTGAATTTTCCGATCCAAGCAATAGTGAATTGTCCCCTGATCAGCAACAATATGATGAGAAAAACATCCGCCGAAGGGTTTATGATGCTCTGAACGTTCTCATGGCAATGGATATTATTTCTAAGGACAAAAAGGAAATCCAATGGAAGGGTCTTCCTCGTACTAGTGTGAATGATATTGAAGAACTAAAGTCTGGAGTTGGTAATTTTGCTCCATCTGGATTATGCTTTCCCTGTGGTGGTGTTCTGAGCTATAACTCTGTAAATACAGAACGTCTTGGGCTCAGGAATAGTATTGAAAAGAAAGCAGCCTATCTGCAGGAGCTTGAGGAGCAATTTCCATTTGCTAATTACTTGTATTATTACGTCAAGTTCATAGGTCTTCAGAACCTTATTCAACGAAATGAGCAGTTATATAGCTCAGGAAATCCTCCCAGTGGAGGTGTATCTTTGCCTTTTATTCTGGTACAGACACGTCCTCATGCAACTGTGGAAGTGGAAATATCAGAAGATATGCAGCTTGTTCATTTTGATTTCAATAGTGCCCCTTTTGAGCTGCACGACGACAATTATGTTCTCAAGGCAATGAAATTTTGTGAGAGACCGCAGGATGATAATACGACACACAATCTTACCGATGGAGGTGAAGGTTCTAGCATGTCAGGCTTGTGTCAGCCACAGATTCCTCCTACAATTTTAAATGTGTCAAATAGGCCTCCAACATCACCTCCTCTCCCTGGCATATTAAAGGCAAGAAGAAATTTGCTGCAGTTGCTAGATCGTCATAATAGTTATTCATCAGTACAGCCAAATCATTCTGTAGTGTGCGACGCACGATATTCTTTCGGAAGGCGATTAACAGAATAA 1278 0.4264 MGDDDEEEVVGCATTVSGQSASTNSLPPPADNTLLKLNHLDIHADDAGSHASVASVLSTNLFFFVSSTMLFHFLSLIFNFLKIKLILTSTGKKKKRGQRAVGPDKSGRGLRQFSMKVCEKVESRGRTTYNEVADELVAEFSDPSNSELSPDQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSVNDIEELKSGVGNFAPSGLCFPCGGVLSYNSVNTERLGLRNSIEKKAAYLQELEEQFPFANYLYYYVKFIGLQNLIQRNEQLYSSGNPPSGGVSLPFILVQTRPHATVEVEISEDMQLVHFDFNSAPFELHDDNYVLKAMKFCERPQDDNTTHNLTDGGEGSSMSGLCQPQIPPTILNVSNRPPTSPPLPGILKARRNLLQLLDRHNSYSSVQPNHSVVCDARYSFGRRLTE 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3496g00005 425 Pfam Transcription factor DP 223 346 IPR014889 -
Mupr3496g00005 425 SMART E2F_TDP_2 105 188 IPR003316 GO:0005667|GO:0006355
Mupr3496g00005 425 Pfam E2F/DP family winged-helix DNA-binding domain 108 188 IPR003316 GO:0005667|GO:0006355
Mupr3496g00005 425 SUPERFAMILY E2F-DP heterodimerization region 224 346 IPR037241 -
Mupr3496g00005 425 FunFam Transcription factor-like protein DPB 100 193 - -
Mupr3496g00005 425 Gene3D Transcription factor DP 221 351 IPR038168 -
Mupr3496g00005 425 PANTHER TRANSCRIPTION FACTOR DP 21 347 IPR015648 GO:0005667|GO:0051726
Mupr3496g00005 425 SUPERFAMILY "Winged helix" DNA-binding domain 108 189 IPR036390 -
Mupr3496g00005 425 SMART DP_2 223 392 IPR014889 -
Mupr3496g00005 425 MobiDBLite consensus disorder prediction 13 28 - -
Mupr3496g00005 425 FunFam Transcription factor-like protein DPB 219 355 - -
Mupr3496g00005 425 CDD DP_DD 227 333 IPR014889 -
Mupr3496g00005 425 Gene3D - 101 195 IPR036388 -
Mupr3496g00005 425 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3496g00005 Mupr-Chr3496 54799 57981 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3496g00005 94 343 E2F-DP Transcription Factor Family AT5G02470 45.817 1.81e-67 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Mupr3496g00005 DP 8.9e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3496g00005 K04683 - gmx:100798342 530.406