Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr347g00003 ATTGAATTTGGTGGGATTGAAATCCGGTGTGTGGCGTGCGTATATAGAAATAGAGAGAGAAGGGGTGGCATCTTTGTTTGTTTGAACTCAACAGAGTCACTCCTTCACTCGAACACAACACAACACATGGACGCAGGAGCTCCGTACAACCCCCGCACCGTCGAAGAGGTTTTCAGAGATTTGAAGGGCCGCAGAGCCGGCATGATTAAAGCCCTCACCACCGATGTCGAAGACTTCTATCAGCAGTGTGATCCAGAGAAGGAAAATCTTTGCCTTTATGGATTTCCTAGCGAGCACTGGGAAGTTAATCTGCCTGCTGAGGAGGTTCCTCCTGAGCTTCCAGAGCCAGCATTGGGTATTAACTTTGCCAGAGACGGGATGCAAGAAAAGGACTGGCTATCCCTAGTTGCTGTGCACAGTGATGCTTGGTTACTTGCTGTGGCTTTTTATTTTGGTGCTAGATTTGGGTTTGATAAGGCTGACAGGAAACGACTGTTTAATATGATAAATGATCTTCCAACAATATTTGAGGTTGTTGCAGGGAATGCCAAGAAACAAGGAAAGGAAAAGTCATCGGTTTCTAATCATAGCAGTAACAAATCTAAATCAAACTCTAAGAGAGGTTCTGAATCTCAAGGGAAGTATTCAAAAGCAATGCAATCAAAGGACGAGGATGAGAATGGTTTAGAAGAGGACGATGAAGAGGAGCATGGAGAGACACTTTGTGGGGCATGTGGAGAGAACTATGCGGGTGATGAGTTCTGGATATGCTGTGATATTTGTGAGAAGTGGTTTCATGGAAAATGTGTGAAGATTACCCCTGCTAGGGCTGAGCATATCAAGCACTACAAATGTCCATCTTGCACCAACAAGAGAGCTCGACCT 885 0.4508 IEFGGIEIRCVACVYRNRERRGGIFVCLNSTESLLHSNTTQHMDAGAPYNPRTVEEVFRDLKGRRAGMIKALTTDVEDFYQQCDPEKENLCLYGFPSEHWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADRKRLFNMINDLPTIFEVVAGNAKKQGKEKSSVSNHSSNKSKSNSKRGSESQGKYSKAMQSKDEDENGLEEDDEEEHGETLCGACGENYAGDEFWICCDICEKWFHGKCVKITPARAEHIKHYKCPSCTNKRARP 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr347g00003 295 CDD PHD_AL_plant 241 291 IPR044104 -
Mupr347g00003 295 FunFam PHD finger alfin-like protein 233 290 - -
Mupr347g00003 295 Pfam Alfin 53 180 IPR021998 GO:0006355|GO:0042393
Mupr347g00003 295 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 232 290 IPR013083 -
Mupr347g00003 295 MobiDBLite consensus disorder prediction 186 235 - -
Mupr347g00003 295 SMART PHD_3 241 289 IPR001965 -
Mupr347g00003 295 ProSiteProfiles Zinc finger PHD-type profile. 239 291 IPR019787 -
Mupr347g00003 295 PANTHER CPG BINDING PROTEIN 50 294 IPR045104 GO:0006355|GO:0042393
Mupr347g00003 295 Pfam PHD-finger 242 291 IPR019787 -
Mupr347g00003 295 SUPERFAMILY FYVE/PHD zinc finger 231 292 IPR011011 -
Mupr347g00003 295 ProSitePatterns Zinc finger PHD-type signature. 242 288 IPR019786 -
Mupr347g00003 295 MobiDBLite consensus disorder prediction 192 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr347g00003 Mupr-Chr347 5120 7636 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr347g00003 43 294 Alfin-like Transcription Factor Family AT3G42790 75.494 1.39e-122 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Alfin-like Mupr347g00003 Alfin 1.2e-68 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr347g00003 K26274 - mnt:21387296 455.292