Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr347g00002 ATGCCTTTCACAGTTTTTATCGTTGTTTCCAATCACCAAGGAATCGTGTCTGAAATTAATATTCCCCGTAGCGGCGCTGTCTCTGTGGCGCCGCTACTACCACCCCCACACACATTTCAATATTCCCCACCGGAAGTAACAAGTTTTGTGTCTCCAATCCATAACGCATCCATGGATAATAATAACTCCAGGTTTGTTTCCAACGATGAAGATCCATTTGACAGTCAACTTATCGATAACTTCGTCGAGGTGGACCCCGCACTTGTTCTACCCAATCCCAATGCAGTGCCCCAGCAACAAAACCATCGTTTCGGTCTTCTACAGGGTAATATTCCCTTCCCAAATTCAGTGATCCAAGATCAATCCATGCAGGGCAATAATAATTTTACCTTTGGAGGAGGAGTTGGTAACATTGACGTGGGGGGCCCAAAGCGTAAACATCCCTTCGCGGATCCAATGATTGAAGATCAAGTCATGCATGACAATAATAATGTTCCCAATGGAGGGGGAGTTGGTAACGTTGAATCAGATTCACCGTTTCAAATGCAGCCACCAAAGCAGAATATGGGTCCACCACGGAATTGCCAAAACATGATCGCACTTCCGTATTGGCCCCAGATACCAAGGCCATTCTTTTGCAGTTGCTGTCAAGTTCTTAGACAAATAATTCACACCGATGGTTTTATATTTGAGAAGCTTGAGATTCATGGAACGATCGGGGTGATTAGCCATGCAATAATCCAGAATCGGAGTATCACACCAGATGGTCCTCCAACTGACGCTCATCAAATGATTGATTTCTCCTACAAAACCCCAGAACAAATTAGGAGTTTCCTAATAAGCTACTGCAAACAGCAGATTAAATTAGGGTGCGTTATTGTGAAAGATCCGTTGTCTGCGTATTATGAGACCATTTGCGCTAGATTGGATTGGGCTGAAGAAATTGGTGATGAAGACGATGATTCGATTCCACAAAGTGACATGGACGAAGATACTGAACCCGAGACCGAGCCCGAGAATGGAACTTCTAAACGGCGTAATATGGGAATTCAGAGGAGGAGAGTACAAAATATGACATTGAATGATTTGAGCGGTGTGTTCCATATAACTATGAATGCTGCATCGAAAATACTGGACCTATCCGTCACTTCCATAAAGAAAATCTGTCGCAGGGGAGATTTAGATCGATGGCCCCAATCTGAGGTGAACACCCTTGCGAAGCAGGTGGCAGTGCTGAGAAGAGCATTGGATTCACCAGATCCAGGGACAAGGGAAAGAACTCGACAGGAAATTCAAAGACTTCAAGAAGAAATAATTGCGAAATGTATGGGAATTACCCCAACTGGAATAGAAATGCTCCAATTCTAA 1368 0.4393 MPFTVFIVVSNHQGIVSEINIPRSGAVSVAPLLPPPHTFQYSPPEVTSFVSPIHNASMDNNNSRFVSNDEDPFDSQLIDNFVEVDPALVLPNPNAVPQQQNHRFGLLQGNIPFPNSVIQDQSMQGNNNFTFGGGVGNIDVGGPKRKHPFADPMIEDQVMHDNNNVPNGGGVGNVESDSPFQMQPPKQNMGPPRNCQNMIALPYWPQIPRPFFCSCCQVLRQIIHTDGFIFEKLEIHGTIGVISHAIIQNRSITPDGPPTDAHQMIDFSYKTPEQIRSFLISYCKQQIKLGCVIVKDPLSAYYETICARLDWAEEIGDEDDDSIPQSDMDEDTEPETEPENGTSKRRNMGIQRRRVQNMTLNDLSGVFHITMNAASKILDLSVTSIKKICRRGDLDRWPQSEVNTLAKQVAVLRRALDSPDPGTRERTRQEIQRLQEEIIAKCMGITPTGIEMLQF 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr347g00002 455 ProSiteProfiles RWP-RK domain profile. 338 426 IPR003035 -
Mupr347g00002 455 MobiDBLite consensus disorder prediction 317 336 - -
Mupr347g00002 455 PANTHER PROTEIN RKD4 71 437 IPR044607 GO:0003700
Mupr347g00002 455 Pfam RWP-RK domain 357 403 IPR003035 -
Mupr347g00002 455 MobiDBLite consensus disorder prediction 317 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr347g00002 Mupr-Chr347 2149 4010 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr347g00002 313 405 AtRKD Transcription Factor Family AT4G35590 29.032 8.60e-07 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Mupr347g00002 RWP-RK 1.1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr347g00002 - - gmx:102660093 322.783