Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3477g00001 GAGCTCCCTGATAGGAAATACTGGGCAAACATCACCCATGCAATCACCAAATGTGAAGCGAAGAACAATATCAACGTCAAATATCAGTTTGGGATGTTCGCAGATGCTATCATGAATGACGTTATCACTTCCAATTTTAAGGAAAGATACTTCTATTGTCTTTGGTGGGGTTTGAGAAATCTTAGCTCATATGGACAGAATTTGGACACCACCACGTATCTTCCGGAGACATTCTTTTGCATCGTCTTATGCATTGCTGGATTGGTTCTATTTTCACTTTTGATTGGAAACATGCAGACGTACTTGCAATCGATGACAGTTAGACTTGAAGAATGGAGGATTCGAAAAAGAGATACTGAGGAGTGGATGAGGCATCGCCAGTTACCACAAGATTTGCAGGAACGTGTCCGTCGTTTTGTTCAATATAAATGGCTTGCAACAAGAGGAGTTAATGAAGAAGCCATAATGCTTTCGCTGCCTTTGGATCTTCGTCGAGAAATTCAGCATCACTTGTGTCTTTCTCTTGTGCGCCGCGTCCCCTTCTTCTCGCAAATGGATGATCTACTCCTTGATGCCATATGTGAACGCCTTGTATCATCACTAAGCACCGAGGGCACCTACATATTTCGAGAGGGTGATCCAGTAGATGAAATGTTGTTTATCATCAGAGGGCAATTGGAGAGCTCCACAACCAATGGAGGAAGGTCTGGATTCTTCAATTCCATCACACTCCGGCCTGGTGACTTCTGTGGAGAGGAATTGTTGACATGGGCCTTAATGCCAAACTCAACCCTCAACCTACCTTCTTCAACTCGTACCGTCAAAGCTCTTTCTGAAGTTGAAGCTTTTGCACTACAGGCAGAGGATCTGAAGTTTGTGGCAAGTCAGTTCAAGCGCTTACACAGCAAGAAACTTCAGCATGCGTTTAGGTATTATTCCCATCAATGGAGGACATGGGGTTCTTGCTTCATACAAGCTGCTTGGAGAAGGTTTCAGAAGAGAAAGGCAACAAGGGAGTTATCCCTCAAAGAGCGACTCTACTACATGAGGGATGAAATTAGAAATCGTGAGGAGGATGAGATTGGGGAATCCTCAGGGAGTGTGAAAAGGATTCAGAATCTTGGTGCAACTGTTTTGGCCTCAAGGTTTGCTGCCAATACAAGGAAGGGGACACATAAGCTACAAGTCAGTGATCCTGTGCCCCAATTGTTCAAGCCTGATGAACCTGATTTTTCGTAG 1239 0.4423 ELPDRKYWANITHAITKCEAKNNINVKYQFGMFADAIMNDVITSNFKERYFYCLWWGLRNLSSYGQNLDTTTYLPETFFCIVLCIAGLVLFSLLIGNMQTYLQSMTVRLEEWRIRKRDTEEWMRHRQLPQDLQERVRRFVQYKWLATRGVNEEAIMLSLPLDLRREIQHHLCLSLVRRVPFFSQMDDLLLDAICERLVSSLSTEGTYIFREGDPVDEMLFIIRGQLESSTTNGGRSGFFNSITLRPGDFCGEELLTWALMPNSTLNLPSSTRTVKALSEVEAFALQAEDLKFVASQFKRLHSKKLQHAFRYYSHQWRTWGSCFIQAAWRRFQKRKATRELSLKERLYYMRDEIRNREEDEIGESSGSVKRIQNLGATVLASRFAANTRKGTHKLQVSDPVPQLFKPDEPDFS 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3477g00001 412 SMART cnmp_10 181 312 IPR000595 -
Mupr3477g00001 412 MobiDBLite consensus disorder prediction 388 412 - -
Mupr3477g00001 412 Pfam Ion transport protein 43 108 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mupr3477g00001 412 Gene3D Jelly Rolls 179 299 IPR014710 -
Mupr3477g00001 412 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 15 411 - -
Mupr3477g00001 412 FunFam Cyclic nucleotide-gated ion channel 1 108 172 - -
Mupr3477g00001 412 SUPERFAMILY Voltage-gated potassium channels 45 144 - -
Mupr3477g00001 412 ProSiteProfiles cAMP/cGMP binding motif profile. 181 311 IPR000595 -
Mupr3477g00001 412 FunFam Cyclic nucleotide-gated ion channel 1 179 297 - -
Mupr3477g00001 412 CDD CAP_ED 181 312 IPR000595 -
Mupr3477g00001 412 Pfam Cyclic nucleotide-binding domain 204 292 IPR000595 -
Mupr3477g00001 412 Gene3D Helix hairpin bin 103 172 - -
Mupr3477g00001 412 SUPERFAMILY cAMP-binding domain-like 111 306 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3477g00001 Mupr-Chr3477 18 2682 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3477g00001 1 412 Ion Channels AT5G14870 69.746 0.0 626
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3477g00001 K05391 - gmx:100802812 740.725