Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3475g00001 ATGCCAAAAGCGGGGTTACAAGTTGCGAAGACCCTGAAAGTTGCTTTAATCATAGCAATAAACCTTGACAAGTTCCTTTCAAGGCAAAAAGGGGAAACAGGGAACACAGAAGAGATGGAAGCTAGACAAATTGGAGAAAATGGAGGGAGAAAAAAGGGCCTTGAGGGAAGTGGTATTGATATTGTTGAGAAACAAAATGAAGAGGTTCTAAAGAAGATTATTGCTACTCATCCTTTGTATGGAGTTTTGATTCAATCCCACATTAACTGCTTGAAGGTGGGATTAAGCGAAGCTGGAGAGTTTGATGCAACAAGTGATGCATGGAAGAAGCTGGTTGACTCGAAGTCCAAAGCAACTCCTAGTCCAAACACTTCAGAGTTAGATCACTTCATGGAAGCGTATTGCATGGCATTGAGCAAGCTGAAGGAAGCGATAGAGGAACCAACAAAAGAAACAAATGCTTTCATCAGAGCTACGTATGTTGAACTAAAGGAACTCAATGAACTGAAAGAGCCATAA 519 0.4104 MPKAGLQVAKTLKVALIIAINLDKFLSRQKGETGNTEEMEARQIGENGGRKKGLEGSGIDIVEKQNEEVLKKIIATHPLYGVLIQSHINCLKVGLSEAGEFDATSDAWKKLVDSKSKATPSPNTSELDHFMEAYCMALSKLKEAIEEPTKETNAFIRATYVELKELNELKEP 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3475g00001 172 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 39 171 - -
Mupr3475g00001 172 Pfam KNOX2 domain 125 166 IPR005541 GO:0003677|GO:0005634
Mupr3475g00001 172 Pfam KNOX1 domain 70 94 IPR005540 GO:0003677|GO:0005634
Mupr3475g00001 172 MobiDBLite consensus disorder prediction 31 51 - -
Mupr3475g00001 172 MobiDBLite consensus disorder prediction 31 49 - -
Mupr3475g00001 172 SMART KNOX1_2 68 110 IPR005540 GO:0003677|GO:0005634
Mupr3475g00001 172 SMART KNOX2_2 114 168 IPR005541 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3475g00001 Mupr-Chr3475 2674 5206 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3475g00001 68 166 Homeobox Transcription Factor Family AT4G08150 34.951 2.43e-12 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3475g00001 - - gmx:102669720 223.402