Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3461g00001 ATGGCCAGACCACAACAGCGTTACCGAGGTGTCCGACAAAGGCATTGGGGCTCTTGGGTCTCCGAAATTCGCCACCCCATATTGAAGACTAGGATATGGCTTGGTACATTTGAAACAGCTGAGGATGCTGCTAGAGCCTATGATGAAGCAGCTAGGCTAATGTGTGGTGCCAGGGCAAGGACAAACTTCCCTTTCAACCCCAATGTGTCTCACTCATCATCATCTTCTAGTTCAAAGCTTCTCTCAGCAACCTTGACTGCCAAACTGCACAGGTGCTACATGGCTTCTTTGCAAATGACAAGACAGGCTTTGGCATCAGAGCCTCAAAGAACAACAACACCTTCAGTGCCAAATGCAACCTCCAACACCACACTAACCAACTTCAGTGTGAAGAGTGGCCAAACTCATGCAGTGTTGCCACACAAGAGACCAGAGGAGCAGCAAGAGTCAGAGGCCAACAGGGGTGTTAAAAGGGTTAAATCTGTGGAAAATGTTCCTCTACAGTTCAAGCCTCTTGAGGAAGATCACATAGAGCAAATGATTGAGGAGCTTCTTGATTATGGTTCTATTGAGCTCTGCTCTGTCTTTCCACCACAGGCCCTGTAG 606 0.4802 MARPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGARARTNFPFNPNVSHSSSSSSSKLLSATLTAKLHRCYMASLQMTRQALASEPQRTTTPSVPNATSNTTLTNFSVKSGQTHAVLPHKRPEEQQESEANRGVKRVKSVENVPLQFKPLEEDHIEQMIEELLDYGSIELCSVFPPQAL 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3461g00001 201 SMART rav1_2 7 70 IPR001471 GO:0003700|GO:0006355
Mupr3461g00001 201 Gene3D AP2/ERF domain 6 65 IPR036955 GO:0003700|GO:0006355
Mupr3461g00001 201 PRINTS Ethylene responsive element binding protein signature 8 19 IPR001471 GO:0003700|GO:0006355
Mupr3461g00001 201 PRINTS Ethylene responsive element binding protein signature 30 46 IPR001471 GO:0003700|GO:0006355
Mupr3461g00001 201 CDD AP2 6 64 IPR001471 GO:0003700|GO:0006355
Mupr3461g00001 201 ProSiteProfiles AP2/ERF domain profile. 7 64 IPR001471 GO:0003700|GO:0006355
Mupr3461g00001 201 SUPERFAMILY DNA-binding domain 7 65 IPR016177 GO:0003677
Mupr3461g00001 201 MobiDBLite consensus disorder prediction 139 158 - -
Mupr3461g00001 201 MobiDBLite consensus disorder prediction 139 159 - -
Mupr3461g00001 201 Pfam AP2 domain 7 56 IPR001471 GO:0003700|GO:0006355
Mupr3461g00001 201 MobiDBLite consensus disorder prediction 103 126 - -
Mupr3461g00001 201 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 6 144 - -
Mupr3461g00001 201 FunFam Ethylene-responsive transcription factor 2 6 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3461g00001 Mupr-Chr3461 7393 8550 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3461g00001 1 201 AP2-EREBP Transcription Factor Family AT5G25190 60.476 4.27e-78 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mupr3461g00001 AP2 6.6e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3461g00001 - - gmx:100785918 333.569