Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3457g00005 ATGGAGAGTCGCCGGAGGATAACGCTTTACGACCAAATGACAGCTGGCAGCAGCAGCAGCCGAGACTCGCTAGCCAGCCTCATGCTCAGCGATGCCATTTTCAAGAAGGCCGAGGCCGAAGCCGAAGCGAGCCGCAAGCTGAGCCAAAGTCGAACTCTCCAAGACATCATTCGCGAAGACGAACCCAACAACAACAGTAACAACATCGCGAAGGATCGCAACTCGTGGAAAGCCTTCAAGGAAAAACTTAGGCTCAAGCGCGCCATCGGCTCGGCTTGGTCCTCCGCCGCCAATAACAATAATAACGATAACAATGATAGGAATTTACCTCAAACTCAGCAAAACGACGTCGTTGTAGAAAACGCCAACGATTCGGTTCCGATCGCGCTATTCGGGTCTCCGGCGGACAACGCGGCTGCCGGCGGCGACTCCTCCGACGGGGAGAATAACCACGAGGCGGCGGTTGGCGTGTCGCTGATGGATTTGTTGGAGGAGACGGAACAGGAAATAGATTTGTATAGAGTGAGCGATGAGGATGACGTGGCAGAATACGAGAAGGGAGAAGAAGAAGAAAAAGAGTTAGTGGAAGAAGTGGGGGGTGTGGTGGAGTATAACTGCTGCGTGTGCATGGTGAGGCATAAAGGTGCGGCCTTTATCCCCTGCGGACACACGTTTTGCAGAATGTGTTCCAGGGAGATTTGGTTGGAAGGGTTTGCCAGAAAAATTATTATAAATTCAGGATTGTATGTACAATACGCATTTGTTGATTTAAGTGGGGGTGTCCATAAAATATTGAGGGACCTGAGATATAGAAATAAGGAAAGGTTAAGTGTTGGATCGAGTGGGATAATGGGTAATGCGGGTGCATCATCAACGGGGGATTGGGCAAAGCCATTAGATGATGCAAATGGACGTAATTCTGTGTAA 927 0.4995 MESRRRITLYDQMTAGSSSSRDSLASLMLSDAIFKKAEAEAEASRKLSQSRTLQDIIREDEPNNNSNNIAKDRNSWKAFKEKLRLKRAIGSAWSSAANNNNNDNNDRNLPQTQQNDVVVENANDSVPIALFGSPADNAAAGGDSSDGENNHEAAVGVSLMDLLEETEQEIDLYRVSDEDDVAEYEKGEEEEKELVEEVGGVVEYNCCVCMVRHKGAAFIPCGHTFCRMCSREIWLEGFARKIIINSGLYVQYAFVDLSGGVHKILRDLRYRNKERLSVGSSGIMGNAGASSTGDWAKPLDDANGRNSV 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3457g00005 308 CDD RING-HC 206 237 - -
Mupr3457g00005 308 SUPERFAMILY RING/U-box 205 233 - -
Mupr3457g00005 308 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 176 242 IPR013083 -
Mupr3457g00005 308 Pfam Zinc finger, C3HC4 type (RING finger) 206 235 IPR018957 GO:0046872
Mupr3457g00005 308 MobiDBLite consensus disorder prediction 1 22 - -
Mupr3457g00005 308 PANTHER OS01G0917900 PROTEIN 2 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3457g00005 Mupr-Chr3457 13985 15791 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3457g00005 4 236 C3H Transcription Factor Family AT3G25030 32.794 4.65e-30 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3457g00005 - - gmx:100819018 290.041