Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3451g00001 ATGGAATTTGACGAGCACGAAGACCAAGAGGAGGAGGAGGAAGAGGAAGAGGAGGAAATGGGATTCCCGGTGGCGGCGGCGGCGGCCGGTTACGACTCGCTGGGAAACGCCGCGGCGAGGTCCAAAATGAGCGCCACCGAGGGAGTTGCGGCCACCGTGAATTCCGGTCGCAAAGGCGGGTCCACGGGGACGGTCAGATACAGAGAATGTCAGAAGAACCACGCCGTCAGCATCGGCGGCCACGCCGTCGACGGCTGCTGCGAGTTCTTGGCCGCCGGAGAGGAAGGCACGCTGGAGGCCGTAATTTGCGCCGCCTGTAACTGCCACCGCAATTTCCACCGCAAGGAGATCGACGGCGAAATCAACGCTTACCATCAGCAACCGCGGTCGCAGCCGCAGCCTCAGCCGCTGCACCCTCAGTACCACCATCAATTCTCCCCTTACTACCACCGCGCGCCACCTCCTTCCGCCGGCGGATACCTCCACCACCACATGATAACTCCTCCTGTATCGCACCACCGGCCCTTGGCTCTGCAGCCACTGGCTTCGGGAGGAGTGTTCAGTAGGGAAGAGGAGGACATGTCAAACCCCAGCAGCAGCGGCGGCGGCGGCTTTGGCGGCGGTGGTGGTAGCGGCAGCGGAACGAAGAAGAGGCATAGGACAAAGTTCACGCAGGAGCAGAAGGATAAGATGCTGGCATTTGCTGAGAAGCTAGGGTGGAGAATCCAGAAGCACGACGAAGCTGCTGTGGAGCAATTCTGCGAGGAAACTTGTGTCAAGAGACATGTGCTCAAGCCAATTCTGAGCAACGTTCAGCTGGGAATGGATCGAACCACATGGGCAACTCAACAATACTTGCGAATTCTGAATTCTCCTAAGGGAAATAAAGGAAGTAAAGAGAAAGATGGAAGTTCATTGAAGGGTTTGCAAGTGTTCATCTTATCATCAGGTGATAGTGAGGAGGGGAGTATGGAGTGGAAGTATGCGGATGAGCACAGAGAATAA 1005 0.5701 MEFDEHEDQEEEEEEEEEEMGFPVAAAAAGYDSLGNAAARSKMSATEGVAATVNSGRKGGSTGTVRYRECQKNHAVSIGGHAVDGCCEFLAAGEEGTLEAVICAACNCHRNFHRKEIDGEINAYHQQPRSQPQPQPLHPQYHHQFSPYYHRAPPPSAGGYLHHHMITPPVSHHRPLALQPLASGGVFSREEEDMSNPSSSGGGGFGGGGGSGSGTKKRHRTKFTQEQKDKMLAFAEKLGWRIQKHDEAAVEQFCEETCVKRHVLKPILSNVQLGMDRTTWATQQYLRILNSPKGNKGSKEKDGSSLKGLQVFILSSGDSEEGSMEWKYADEHRE 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3451g00001 334 MobiDBLite consensus disorder prediction 1 21 - -
Mupr3451g00001 334 MobiDBLite consensus disorder prediction 1 26 - -
Mupr3451g00001 334 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 66 117 IPR006456 -
Mupr3451g00001 334 SUPERFAMILY Homeodomain-like 203 267 IPR009057 -
Mupr3451g00001 334 Gene3D - 205 273 - -
Mupr3451g00001 334 MobiDBLite consensus disorder prediction 188 225 - -
Mupr3451g00001 334 NCBIfam homeobox domain, ZF-HD class 216 267 IPR006455 -
Mupr3451g00001 334 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 67 116 IPR006456 -
Mupr3451g00001 334 MobiDBLite consensus disorder prediction 125 166 - -
Mupr3451g00001 334 MobiDBLite consensus disorder prediction 125 140 - -
Mupr3451g00001 334 Pfam ZF-HD protein dimerisation region 65 117 IPR006456 -
Mupr3451g00001 334 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 45 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3451g00001 Mupr-Chr3451 14071 15519 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3451g00001 14 276 ZF-HD Transcription Factor Family AT4G24660 45.833 3.48e-60 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Mupr3451g00001 ZF-HD_dimer 3.3e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3451g00001 - - pvu:PHAVU_009G037900g 416.001