Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr344g00006 ATGGAATCTTGGAGTTTTGTCCCTGAAGAAAAGGAGTGTGTCTCCAATGAGCCACCCTCGCCTCCCAATACTCTCGGGAGGACCAAAAATTCTTTCTTGGCCTGGGAACTCAAAACCCCATGTGCCTTTTCCAACGACATGCTGGCCTTGGGTCAGCACAACATTGATAATCAAGCTTTTGAGGAATTGGGTTTTCCTGAAATGTTAGGAAAACACTTGCCCGATGATCTAATTGGGAGTGTTCCAAGCAGAAAGTTTGATGCTAGAGAACAACAACAACAACAACAGCACAGTGGCACTGTTGTGGATGCCCCAAGTGGGTTTTCTCAAAGAGGGGACTCAAATTCCAAGGATTCCCTCATTGATTTGAAGCTGGGTCATTTTGGTGACCATGGTGATGTAACTGATCCAGCCTTTTCCAAAGTTTTGTCCTCTTCTGAGTCATCAACTCCCCCTAAGAGAGTCAGGGTTTCTGGGGTGCACTCTCAGGCTGCATACTGCCAAGTCTATGGCTGTAACAAGGATCTCAGCTCCTGTAAGGACTACCACAAGAGGCACAAGGTGTGTGAGGTTCACTCCAAGACTGCTACAGTCATAGTCAATGGCATCGAGCAAAGGTTTCACTTGCTGGCTGAATTTGATGATGGTAAGCGAAGCTGCCGCAAACGCCTTGCAGGCCATAATGAGCGTAGAAGAAAACCACAAATTGGTATTCACTCCGGAAAGTCTGGGAGGTTGCTTCAGCCATGTGGGGATAGCAGATTCCAGGGAACCATGCTAACATCAGCATCTTTTATTCGCCCAGGGATGCTCCCTAGTGGCATCATGCATTCGGAGAAATATGGTATGAGTGGCTTCTGGAGACCTATCAAAGCAGAACACGGGACCGGTTTTAGGCATCTTTCTTCTATGCCTGTGACCAATGGACATCCTCAGTCAAGATCTCTATTTCCTTCATATAACGAAAAACAATTTCCTTTTCTTCAAGAAAATGGTGCGACATCCACCACAGGAAGCATCTTCTGTGAGAGCAATAGCCACTATCCACCTACCCTTGGGGCTCAAAATTCTGGGTTAAGACCACTATTCCAGGACACATTAGGAAATGAGGACTTCAATGTTTTTGACACAGCATCAACTGTTCAAGGATTATCAGGGATTTCAGACTCTTGTTGTGCTCTCTCTCTTCTGTCATCTCAATCCCAGAACTCCTCAAGCCAATCATCAGGAATTCCCTTGGCTCACTCCTTGGTCATTCCAAGCAGTCATGGCCATCACTACAACATGAATCAAGTCTCTGAAAAGATAGGAATAAGCTCACAGACTTCATCAAGCCGAGTGTCAGATAGCTTTCCATCAGAACTAAATCATGCAGATGGAAGTCATCTCAGTCCTGTATTAATATCAGACAACAATGATATGGTAAACTTTGACATGGCAGATGGTATCTTCCAAGGTTCAGATTTCTTGAATGTGAAAGATCGTCTTTCATGTGAAGATGGCGCAACCATTAACTTGCTACAATTGTCATCACAACTTCAGCGAGTTGAGAACGAGAGGCAATCCTTGCAGGTGAAGCAAGAGAATGATTCTTCTTGCACTCTGCGGATTACATAA 1617 0.4502 MESWSFVPEEKECVSNEPPSPPNTLGRTKNSFLAWELKTPCAFSNDMLALGQHNIDNQAFEELGFPEMLGKHLPDDLIGSVPSRKFDAREQQQQQQHSGTVVDAPSGFSQRGDSNSKDSLIDLKLGHFGDHGDVTDPAFSKVLSSSESSTPPKRVRVSGVHSQAAYCQVYGCNKDLSSCKDYHKRHKVCEVHSKTATVIVNGIEQRFHLLAEFDDGKRSCRKRLAGHNERRRKPQIGIHSGKSGRLLQPCGDSRFQGTMLTSASFIRPGMLPSGIMHSEKYGMSGFWRPIKAEHGTGFRHLSSMPVTNGHPQSRSLFPSYNEKQFPFLQENGATSTTGSIFCESNSHYPPTLGAQNSGLRPLFQDTLGNEDFNVFDTASTVQGLSGISDSCCALSLLSSQSQNSSSQSSGIPLAHSLVIPSSHGHHYNMNQVSEKIGISSQTSSSRVSDSFPSELNHADGSHLSPVLISDNNDMVNFDMADGIFQGSDFLNVKDRLSCEDGATINLLQLSSQLQRVENERQSLQVKQENDSSCTLRIT 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr344g00006 538 MobiDBLite consensus disorder prediction 86 115 - -
Mupr344g00006 538 Pfam SBP domain 167 233 IPR004333 GO:0003677
Mupr344g00006 538 MobiDBLite consensus disorder prediction 1 27 - -
Mupr344g00006 538 Gene3D - 157 221 IPR036893 GO:0003677|GO:0005634
Mupr344g00006 538 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 97 522 IPR044817 GO:0003677
Mupr344g00006 538 Coils Coil 506 526 - -
Mupr344g00006 538 ProSiteProfiles Zinc finger SBP-type profile. 164 234 IPR004333 GO:0003677
Mupr344g00006 538 SUPERFAMILY SBT domain 165 238 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr344g00006 Mupr-Chr344 18742 22395 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr344g00006 121 277 SBP-box Gene Family AT1G69170 50.000 1.12e-42 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mupr344g00006 SBP 4.8e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr344g00006 - - gmx:100812110 888.256