Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3448g00001 ATGAGGAAGCTGAAGTTTCATGAAAAGAAGCTTTTGAAGAAGGTGAATTTTTTGGAATGGAAGAGGGAAGGGGGTCACAGAGAGAACCTGGTTATGCAACGCTACCATATTACTGGACGGGATGATTACAAAAACTACAACTTGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACGCTTAACTGTGTCATCCTTCTGTAGGCGTAGGCTCTCAACTGTTTTGGTGCGACTAAAATTTGCAGAGCATTTGAAAGAAGCTGTGACGTACATTGAGCAGGGGCATATACGAGTTGGTCCGGAGACAGTTACAGACCCAGCTTTCCTTGTAACTAGAAACATGGAAGACTTCGTTACATGGGTGGATTCATCCAAAATAAAGAGAAAGGTGCTTCAGTACAATGACAAGTTGGATGACTATGATTTAATGAATTAA 441 0.4218 MRKLKFHEKKLLKKVNFLEWKREGGHRENLVMQRYHITGRDDYKNYNLGVIPTRQSITLCERLTVSSFCRRRLSTVLVRLKFAEHLKEAVTYIEQGHIRVGPETVTDPAFLVTRNMEDFVTWVDSSKIKRKVLQYNDKLDDYDLMN 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3448g00001 146 Pfam S4 domain 71 117 IPR002942 GO:0003723
Mupr3448g00001 146 FunFam U3 small nucleolar ribonucleoprotein IMP3 71 143 - -
Mupr3448g00001 146 SUPERFAMILY Alpha-L RNA-binding motif 27 139 - -
Mupr3448g00001 146 PANTHER 30S 40S RIBOSOMAL PROTEIN 46 142 IPR022801 GO:0003735|GO:0015935|GO:0019843
Mupr3448g00001 146 SMART s4_6 71 134 IPR002942 GO:0003723
Mupr3448g00001 146 CDD S4 71 139 - -
Mupr3448g00001 146 Gene3D - 71 146 IPR036986 GO:0003723
Mupr3448g00001 146 ProSiteProfiles S4 RNA-binding domain profile. 71 137 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3448g00001 63 112 Cytoplasmic Ribosomal Protein Gene Family AT5G39850 42.000 3.75e-06 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3448g00001 K14560 - gmx:100782389 271.552