Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mupr3445g00004 | ATGGCAACAAAAACACTCATTCCCATCCTAAGATTTCTTGTCTTCATCTTCATGAGCCTCTTCACCATGGCAAGTGCACAATCCCCAAACTACATGGATGACGACTGCCACAACTCAACAACAAATCAAGTCCTCACCCCAACATACCAAACCAACCTTCACAACACCCTCTCATGGCTGTCTTCAGATGCTGCCACAAGCAAGGGATACAACCACACCACCACAGGAATTGGCACAGTTGATGCTGTATATGGCCTCTATGATTGCAGGGGTGATGTCACAGGATCTTTCTGCCAGTTCTGTGTCTCTACTGCAGCCTCAGACATTCTCCAGCGCTGTCCTAACAAAACCTCTGCTGTAATATGGTACAACTACTGCATTCTAAGGTACTCAAACCATAACTTCTTTGGGAACCTTACCATAACCCCATCATGGTATGTTGTGGGGACCAAGAACATCACTAATCCAGAAGAGCTTCAGAAGGCTGAGGATTATATGCAAAGTTTGAAAAGAGAAGCCACTGTGGAGAGCAACAAGTTGTATGCAATGGGAAGTTTCAATTTGAGTGATGGAGAGGAAAGGTATGGGATGGTGCAGTGCAGTAGGGACCTTACTAATGATGAGTGCAGCCAGTGTTTGGAGGATATGATAGACAAAGTTCCTCAGTGTTGTCGGGGAAACCTAGGATGGCAGGTTTTGGCTCCAAGTTGTCTTATAAAGTATGATGATTATATGTTCTACCAGATTACTAATCAAACATCTTCTCCTTTGCCTAATCCAGCTAGGAAGGGAGGTACAATTAAGTCAAAAACCTTGATCATCATCATAGTGAGTGTATTGGTGGCACTAGCTTTACTAAGTTGCTCTACTTACTACTTGTGGAGGCAGTATCTATCAAATAAAGATGCATTGCTATCAGAGACCACACCTATAATATCTTTACATGGCCGTGTTCAAAGAGAGGATGCATTGAATGCAGACCTTCCAACAATCCCTTTAATCTGGATTCGACAGAGCACTAATAACTTCTCAGAGATTTCTAAATTAGGAGAAGGTGGATTTGGTCCTGTTTACAAGGGTAATTTAGAAGATGGGACAGAAATTGCTGTTAAAAGACTCTCTAAAACATCTGGTCAAGGTTTGGAGGAGTTCAAGAATGAAGTGATATTCATAGCCAAACTGCAACATAGGAACCTTGTGAGACTCTTGGGTTGCTGCATTGAGGAAAATGAAAAGCTGCTTGTGTATGAGTACATGTGCAATTCTAGCCTTGATTCTCACCTGTTCAATGAGGGAAAAAGAAAGCAACTAGATTGGAAGTTACGACTGAGTATTATTAATGGAATTGCAAAAGGACTTTTATATCTTCATGAAGACTCCAGACTTAGAGTAATCCATAGAGATCTGAAAGCCAGCAATGTACTGTTGGATCAAGAGATGAATCCAAAAATATCAGATTTTGGATTGGCAAGGACATTTGAAAAAGGCCAGAGTCAGGAAAATACAAAAAGAGTTATGGGCACCTATGGATACATGGCTCCAGAGTATGCTATGGAAGGGTTATATTCAGTGAAATCTGATGTTTTCAGCTTCGGA | 1596 | 0.4148 | MATKTLIPILRFLVFIFMSLFTMASAQSPNYMDDDCHNSTTNQVLTPTYQTNLHNTLSWLSSDAATSKGYNHTTTGIGTVDAVYGLYDCRGDVTGSFCQFCVSTAASDILQRCPNKTSAVIWYNYCILRYSNHNFFGNLTITPSWYVVGTKNITNPEELQKAEDYMQSLKREATVESNKLYAMGSFNLSDGEERYGMVQCSRDLTNDECSQCLEDMIDKVPQCCRGNLGWQVLAPSCLIKYDDYMFYQITNQTSSPLPNPARKGGTIKSKTLIIIIVSVLVALALLSCSTYYLWRQYLSNKDALLSETTPIISLHGRVQREDALNADLPTIPLIWIRQSTNNFSEISKLGEGGFGPVYKGNLEDGTEIAVKRLSKTSGQGLEEFKNEVIFIAKLQHRNLVRLLGCCIEENEKLLVYEYMCNSSLDSHLFNEGKRKQLDWKLRLSIINGIAKGLLYLHEDSRLRVIHRDLKASNVLLDQEMNPKISDFGLARTFEKGQSQENTKRVMGTYGYMAPEYAMEGLYSVKSDVFSFG | 532 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mupr3445g00004 | 532 | SMART | serkin_6 | 343 | 532 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Mupr3445g00004 | 532 | Pfam | Protein tyrosine and serine/threonine kinase | 346 | 532 | IPR001245 | GO:0004672|GO:0006468 | |
| Mupr3445g00004 | 532 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase B120 | 419 | 510 | - | - | |
| Mupr3445g00004 | 532 | Gene3D | Transferase(Phosphotransferase) domain 1 | 419 | 532 | - | - | |
| Mupr3445g00004 | 532 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 36 | 532 | - | - | |
| Mupr3445g00004 | 532 | FunFam | Cysteine-rich receptor-like protein kinase 10 | 144 | 246 | - | - | |
| Mupr3445g00004 | 532 | ProSiteProfiles | Gnk2-homologous domain profile. | 31 | 135 | IPR002902 | - | |
| Mupr3445g00004 | 532 | FunFam | Cysteine-rich receptor-like protein kinase 28 | 32 | 134 | - | - | |
| Mupr3445g00004 | 532 | Coils | Coil | 159 | 179 | - | - | |
| Mupr3445g00004 | 532 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 311 | 418 | - | - | |
| Mupr3445g00004 | 532 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 464 | 476 | IPR008271 | GO:0004672|GO:0006468 | |
| Mupr3445g00004 | 532 | ProSiteProfiles | Protein kinase domain profile. | 343 | 532 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Mupr3445g00004 | 532 | Gene3D | - | 143 | 246 | IPR038408 | - | |
| Mupr3445g00004 | 532 | Gene3D | - | 29 | 135 | IPR038408 | - | |
| Mupr3445g00004 | 532 | SUPERFAMILY | Protein kinase-like (PK-like) | 324 | 532 | IPR011009 | - | |
| Mupr3445g00004 | 532 | Gene3D | Phosphorylase Kinase; domain 1 | 311 | 418 | - | - | |
| Mupr3445g00004 | 532 | Pfam | Salt stress response/antifungal | 36 | 132 | IPR002902 | - | |
| Mupr3445g00004 | 532 | Pfam | Salt stress response/antifungal | 161 | 244 | IPR002902 | - | |
| Mupr3445g00004 | 532 | ProSiteProfiles | Gnk2-homologous domain profile. | 141 | 246 | IPR002902 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mupr3445g00004 | Mupr-Chr3445 | 19329 | 25170 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mupr3445g00004 | 12 | 532 | Receptor kinase-like Gene Family | AT4G05200 | 44.015 | 4.05e-144 | 429 |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| PK | RLK-Pelle_DLSV | Mupr3445g00004 | PK_Tyr_Ser-Thr | 9.8e-45 | CL0016 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mupr3445g00004 | - | - | lja:Lj0g3v0351729.1 | 812.757 |