Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3437g00002 AAAAGAAAAAGAAAAGGCGCGATCAGTGACGCGTGTGAAGGGTTAACCGTAGAAGTTCTGTCGCGGCACGAAAACAAAGGAAAAGCGGGATTAGGGTTTTGCACTGAACAACTTACCTGCTTCTTGACCTCTCTCACTCTTTCTCCGTTTTCCAAAATGGTTAACCCAAAATGCTTCTTGGACGTCAGCATAGGCGGCGAGTTAGAAGGAAGGATTGTGGTTGACCTCTTCCACGACGTCGTTCCAAAGACCGCCGAGAATTTCCGAGCCCTCTGTACCGGCGAAAAGGGCCTCGGTCCCAACACCGGCGTCCCCCTCCACTACAAGGGTATGCGTTTTCACCGCGTGATCAAAGGATTCATGATCCAAGGCGGCGACATCTCCGCCGGCGACGGCACCGGCGGGGAGTCAATCTATGGCTCCAAGTTTGAAGACGAGAACTTGGAGCTGAAGCACGAGAGGAAAGGGATGCTCTCCATGGCCAACGCGGGGCCCAACACTAACGGTTCTCAGTTCTTTATCACCACCACCCGAACCCCTCACTTGGACGGAAAGCACGTCGTTTTCGGACGGGTCCTCAAGGGAATGGGCGTCGTTCGCTCCGCCGAGCACGTCGTCACCGGAGAGAACGACCGTCCTATTCAAGACGTCGTCGTTGTGGACTGCGGGGAAATTCCCGAAGGGGAAGACGATGGTGTTGTTAACTTCTTTAAGGATGGTGACACTTATCCCGATTGGCCCGCCGATCTTGATGTCAAACCCGATGAACTTCCCTGGTGGATGAGTGCTGTGGACGCTATCAAAGCTCTTGGGAATGAACAGTATAAGAAGCAAGATTATAAGATGGCTCTCAGAAAGTATCGCAAAGCGTTACGATATTTGGATGTTTGTTGGGAGAAGGACGACATTGACCAAGAGAAGAGTGCTGCTTTAAGGAAGACGAAATCTCAAATCTTTACCAACAGTTCTTCTTGTAAATTGAAATTAGGCGATCTACAAGGAGCGTTATTGGATTCAGACTTTGCAATGCATGATGGAGATAATGCAAAAGCTCTGTTTCGCAAAGGCCAGGCATATATGTTACTCAACGACCTAGATTCTGCTGTTGAAAGCTTCAAGAGAGCATTAGAGTTGGAGCCAAATGATGGAGGGATTAAAAAAGAGTATGCCACTGCCAGGAGGAAGGTTGCTGATAGACGTGATCAAGAGAAAAAAGCTTATTCTAAAATGTTCAAATAG 1239 0.4891 KRKRKGAISDACEGLTVEVLSRHENKGKAGLGFCTEQLTCFLTSLTLSPFSKMVNPKCFLDVSIGGELEGRIVVDLFHDVVPKTAENFRALCTGEKGLGPNTGVPLHYKGMRFHRVIKGFMIQGGDISAGDGTGGESIYGSKFEDENLELKHERKGMLSMANAGPNTNGSQFFITTTRTPHLDGKHVVFGRVLKGMGVVRSAEHVVTGENDRPIQDVVVVDCGEIPEGEDDGVVNFFKDGDTYPDWPADLDVKPDELPWWMSAVDAIKALGNEQYKKQDYKMALRKYRKALRYLDVCWEKDDIDQEKSAALRKTKSQIFTNSSSCKLKLGDLQGALLDSDFAMHDGDNAKALFRKGQAYMLLNDLDSAVESFKRALELEPNDGGIKKEYATARRKVADRRDQEKKAYSKMFK 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3437g00002 412 FunFam peptidyl-prolyl cis-trans isomerase D 262 412 - -
Mupr3437g00002 412 Gene3D Tetratricopeptide repeat domain 264 412 IPR011990 GO:0005515
Mupr3437g00002 412 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 57 225 - -
Mupr3437g00002 412 SUPERFAMILY Cyclophilin-like 48 227 IPR029000 -
Mupr3437g00002 412 Pfam Tetratricopeptide repeat 349 382 IPR001440 GO:0005515
Mupr3437g00002 412 CDD cyclophilin_ABH_like 56 223 - -
Mupr3437g00002 412 FunFam Peptidyl-prolyl cis-trans isomerase D 48 230 - -
Mupr3437g00002 412 Gene3D - 48 231 IPR029000 -
Mupr3437g00002 412 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 60 223 IPR002130 GO:0000413|GO:0003755
Mupr3437g00002 412 SUPERFAMILY TPR-like 263 409 IPR011990 GO:0005515
Mupr3437g00002 412 ProSiteProfiles TPR repeat profile. 349 382 IPR019734 GO:0005515
Mupr3437g00002 412 SMART tpr_5 349 382 IPR019734 GO:0005515
Mupr3437g00002 412 SMART tpr_5 264 297 IPR019734 GO:0005515
Mupr3437g00002 412 ProSiteProfiles TPR repeat region circular profile. 349 382 - -
Mupr3437g00002 412 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 59 224 IPR002130 GO:0000413|GO:0003755
Mupr3437g00002 412 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 171 183 IPR002130 GO:0000413|GO:0003755
Mupr3437g00002 412 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 156 171 IPR002130 GO:0000413|GO:0003755
Mupr3437g00002 412 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 125 IPR002130 GO:0000413|GO:0003755
Mupr3437g00002 412 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 184 199 IPR002130 GO:0000413|GO:0003755
Mupr3437g00002 412 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 76 91 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3437g00002 Mupr-Chr3437 10527 14509 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3437g00002 69 222 U-box Gene Family AT5G67530 43.226 1.05e-34 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3437g00002 K05864 - gmx:100803839 697.582