Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3436g00002 ATGGCCATGGCTGTGGCTCAGCACAGGGAAAGTAGCAGCAGTGGAAGCATTGACAAGCATCTAGACTCTGGCAAGTATGTGAGGTACACTGCTGAACAAGTTGAGGCTCTTGAAAGGGTCTACACTGAGTGCCCTAAGCCTAGTTCTTTGAGGAGACAACAATTGATTAGGGAGTGCCCCATTCTCTCCAACATCGAACCTAAGCAAATCAAGGTTTGGTTCCAGAACCGTAGGTGTAGGGAGAAGCAGAGAAAAGAGGCTTCAAGGCTTCAGACTGTGAACCGCAAACTCTCTGCAATGAACAAGTTGTTGATGGAGGAGAATGATCGGTTGCAGAAGCAGGTGTCACAGCTTGTATGCGAGAATGGGTTTATGAGGCAGCAATTGCATACTACATCAGCAGCAACTACTGATGCTAGTTGTGATTCGGTGGTTACCACTCCTCAGCATACTATGAGAGATGCTAATAACCCTGCTGGACTCCTATCAATTGCGGAGGAAACCTTGACAGAGTTCCTTTCAAAGGCTACGGGAACTGCTGTAGATTGGGTCCAGATGCCTGGGATGAAGCCTGGTCCGGATTCGGTTGGGATCTTTGCCATTTCCCAAAGTTGCAGTGGAGTGGCAGCTCGAGCCTGTGGTCTTGTTAGTTTAGAACCTACGAAGATTGCAGAGATCCTTAAAGATCGTCCATCTTGGTTTCGGGACTGTCGGAGCCTAGAAGTTTTTACTATGTTTCCTGCTGGAAATGGAGGAACCATTGAACTTGTTTACACACAGACATATGCTCCAACAACACTGGCTCCTGCCCGGGATTTCTGGACTCTGAGATACACCACAAGTTTGGAAAATGGCAGTCTTGTGGTTTGTGAGAGGTCCCTGTCTGGTTCTGGCACGGGCCCTAATCCAGCTGCTGCTGCTCAATTTGTAAGGGCTGAAACGCTCCCTAGTGGCTACTTGATTCGTCCATGTGATGGTGGAGGGTCAATCATTCACATAGTAGACCACTTAAATCTTGAGGCATGGAGTGTGCCAGAAGTGTTGCGGCCACTTTATGAATCATCAAAGGTGGTTGCTCAGAAAATGACAATTGCGGCACTTCGCTATATCAGGCAAATAGCTCAAGAAACAAGTGGTGAAGTGGTTTATGGATTGGGTAGGCAGCCTGCTGTTCTGCGAACTTTCAGCCAAAGATTGAGCAGAGGCTTCAATGATGCCGTAAATGGATTCAATGATGATGGGTGGTCTGTACTGAACTGTGATGGTGCTGAGGATGTAATTATTGCAGTAAATTCAACAAAGAATTTGAGTGGCACTTCTAATCCAGCAAGTTCCCTTACATTCCTTGGAGGAATTCTCTGTGCAAAAGCTTCTATGTTGCTTCAAAACGTCCCTCCTGCAGTTTTGGTTCGTTTTCTGAGGGAGCACCGCTCAGAGTGGGCTGATTTCAATGTTGATGCTTATGCTGCTGCATCACTGAAAGCTGGCACCTATGCCTATCCAGGGATGAGGCCTACAAGATTCACTGGCAGTCAAATAATCATGCCTCTTGGTCACACCATTGAGCATGAAGAGATGCTTGAAGTTATTAGGCTTGAAGGCCACTCTCTTGCTCAAGAAGATGCTTTTGTTTCTAGAGACATTCATCTCTTACAGATATGTAGTGGGATTGATGAGAATGCTGTGGGGGCTTGTTCTGAGCTCATATTTGCTCCAATTGATGAAATGTTCCCAGATGATGCTCCATTGGTTCCTTCTGGTTTCCGAATCATCCCATTGGATGCAAAACCAGGTGATAAAAAGGATACAGTTGCTACAAATCGGACCCTAGATTTGACATCTGGTTTTGAAGTGGGCCCAGCAACAACAACTGGTACAGATGCATCAACAAGTCAGAACACTCGATCAGTGTTGACTATTGCTTTCCAGTTCCCTTTTGACAGCAGTTTGCAAGATAATGTAGCGGTCATGGCACGCCAATATGTCCGAAGTGTGATTGCCTCTGTGCAGAGGGTTGCCATGGCTATATCTCCTTCTGGTATAAACCCCGCTGTTGGAGCAAAACTTTCTCCTGGTTCTCCTGAGGCTGTAACGCTGGCTCACTGGATCTGCCAAAGTTATAGGCAAGTCTACTCATCTCTCTTTTACTACTTGGGGTCGGACTTACTGCGATCAGATTCTCTTGTTGGTGACATGATGCTGAAACATCTGTGGCATCATCAAGATGCCATTCTATGCTGTTCCCTGAAGTCATTGCCAGTGTTCATATTTGCAAATCAAGCAGGCCTTGACATGTTGGAAACAACTCTAGTGGCTTTACAAGACATCACATTGGATAAAATATTTGATGAGTCTGGACGTAAGGCATTGTGTGCAGACTTTGCCAAGTTAATGGAGCAGGGATTTGCTTATCTGCCAGCTGGAATCTGCATGTCGACGATGGGGCGACACGTTTCATATGACCAAGCCATTGCATGGAAAGTCCTTACTGGAGAAGATAATACTGTTCATTGCTTGGCTTTCTCTTTCATAAATTGGTCATTTGTATGA 2550 0.4592 MAMAVAQHRESSSSGSIDKHLDSGKYVRYTAEQVEALERVYTECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLSAMNKLLMEENDRLQKQVSQLVCENGFMRQQLHTTSAATTDASCDSVVTTPQHTMRDANNPAGLLSIAEETLTEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNGGTIELVYTQTYAPTTLAPARDFWTLRYTTSLENGSLVVCERSLSGSGTGPNPAAAAQFVRAETLPSGYLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQKMTIAALRYIRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSVLNCDGAEDVIIAVNSTKNLSGTSNPASSLTFLGGILCAKASMLLQNVPPAVLVRFLREHRSEWADFNVDAYAAASLKAGTYAYPGMRPTRFTGSQIIMPLGHTIEHEEMLEVIRLEGHSLAQEDAFVSRDIHLLQICSGIDENAVGACSELIFAPIDEMFPDDAPLVPSGFRIIPLDAKPGDKKDTVATNRTLDLTSGFEVGPATTTGTDASTSQNTRSVLTIAFQFPFDSSLQDNVAVMARQYVRSVIASVQRVAMAISPSGINPAVGAKLSPGSPEAVTLAHWICQSYRQVYSSLFYYLGSDLLRSDSLVGDMMLKHLWHHQDAILCCSLKSLPVFIFANQAGLDMLETTLVALQDITLDKIFDESGRKALCADFAKLMEQGFAYLPAGICMSTMGRHVSYDQAIAWKVLTGEDNTVHCLAFSFINWSFV 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3436g00002 849 Gene3D - 198 380 IPR023393 -
Mupr3436g00002 849 Pfam Homeodomain 25 83 IPR001356 GO:0003677
Mupr3436g00002 849 SUPERFAMILY Bet v1-like 163 375 - -
Mupr3436g00002 849 Gene3D - 18 91 - -
Mupr3436g00002 849 Pfam MEKHLA domain 698 848 IPR013978 -
Mupr3436g00002 849 SMART HOX_1 22 88 IPR001356 GO:0003677
Mupr3436g00002 849 CDD START_ArGLABRA2_like 158 374 - -
Mupr3436g00002 849 Coils Coil 90 121 - -
Mupr3436g00002 849 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 21 849 IPR044830 GO:0003700
Mupr3436g00002 849 ProSiteProfiles 'Homeobox' domain profile. 20 84 IPR001356 GO:0003677
Mupr3436g00002 849 Pfam START domain 164 371 IPR002913 GO:0008289
Mupr3436g00002 849 CDD homeodomain 25 85 IPR001356 GO:0003677
Mupr3436g00002 849 FunFam Homeobox-leucine zipper protein REVOLUTA 25 80 - -
Mupr3436g00002 849 SUPERFAMILY Homeodomain-like 24 87 IPR009057 -
Mupr3436g00002 849 CDD bZIP 77 116 - -
Mupr3436g00002 849 ProSiteProfiles START domain profile. 154 382 IPR002913 GO:0008289
Mupr3436g00002 849 SMART START_1 163 373 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3436g00002 Mupr-Chr3436 11412 17140 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3436g00002 1 849 Homeobox Transcription Factor Family AT5G60690 81.776 0.0 1449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mupr3436g00002 START 4.5e-48 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3436g00002 K09338 - gmx:100804870 1635.16