Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mupr3429g00007 | ATGGCATCGCAGTCGAGGAAGAGAGTTGACGCCGTCGATTCTCGCTCTACTTCCGTTCTCGTTCGCGCCAAAGATGGCAGCGCTTTCGCTCGATGCGACGATTGCAAGAAGAATGTGCCGGTGGCGCTCATCGATATGCACAGTTGCAGTCTTGAAGCTAAAATTAAAATGAATCTTGATGCTCAGGTTGTGGAACAGGCTTCCGAAGCTAAGAAGGCAGAGAGGAAGAAGCACAACTCGAAAGAGCCGAAGGCCAAAAAGGCCAAAGCTGAAAAGGGGAAGAAGGTGAAGGATCCTAACAAGCCTAAGCGTCCTCCCACGGCCTTCTTTGCCTTCTTGGATGATTTTAGAAAATCTTTCAAGGAAGCTAACCCTGATTCAAAGGATGTTAAGAGGGTCGGTAAAGAGGCTGGTGAAAAGTGGAAGTCTATGACTGATGAAGAGAAGAAGCCTTATTTGGATAAAGTTGCTGAACTCAAGGTAGAGTATGAGAAGGCTATGGAAAGTTATAGGGCTGGCGAAGATGAAGAAGATCAAGCTGGATCTGACAAGGAAACCACTGCAAAAGAAGTGGAGGAAGTGGAAGAAGAGTTAACTGATGAAGAGTAA | 609 | 0.4647 | MASQSRKRVDAVDSRSTSVLVRAKDGSAFARCDDCKKNVPVALIDMHSCSLEAKIKMNLDAQVVEQASEAKKAERKKHNSKEPKAKKAKAEKGKKVKDPNKPKRPPTAFFAFLDDFRKSFKEANPDSKDVKRVGKEAGEKWKSMTDEEKKPYLDKVAELKVEYEKAMESYRAGEDEEDQAGSDKETTAKEVEEVEEELTDEE | 202 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mupr3429g00007 | 202 | CDD | HMG-box_AtHMGB1-like | 103 | 163 | - | - | |
| Mupr3429g00007 | 202 | PANTHER | HIGH MOBILITY GROUP B PROTEIN 12-RELATED | 5 | 196 | - | - | |
| Mupr3429g00007 | 202 | MobiDBLite | consensus disorder prediction | 84 | 102 | - | - | |
| Mupr3429g00007 | 202 | MobiDBLite | consensus disorder prediction | 167 | 191 | - | - | |
| Mupr3429g00007 | 202 | ProSiteProfiles | HMG boxes A and B DNA-binding domains profile. | 102 | 171 | IPR009071 | - | |
| Mupr3429g00007 | 202 | MobiDBLite | consensus disorder prediction | 122 | 149 | - | - | |
| Mupr3429g00007 | 202 | MobiDBLite | consensus disorder prediction | 167 | 202 | - | - | |
| Mupr3429g00007 | 202 | Coils | Coil | 156 | 176 | - | - | |
| Mupr3429g00007 | 202 | SUPERFAMILY | HMG-box | 93 | 176 | IPR036910 | - | |
| Mupr3429g00007 | 202 | Pfam | HMG (high mobility group) box | 102 | 171 | IPR009071 | - | |
| Mupr3429g00007 | 202 | Coils | Coil | 56 | 76 | - | - | |
| Mupr3429g00007 | 202 | Coils | Coil | 184 | 202 | - | - | |
| Mupr3429g00007 | 202 | MobiDBLite | consensus disorder prediction | 65 | 107 | - | - | |
| Mupr3429g00007 | 202 | FunFam | high mobility group B protein 7 isoform X1 | 97 | 173 | - | - | |
| Mupr3429g00007 | 202 | Gene3D | High mobility group box domain | 86 | 183 | IPR036910 | - | |
| Mupr3429g00007 | 202 | SMART | hmgende2 | 101 | 172 | IPR009071 | - |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TR | HMG | Mupr3429g00007 | HMG_box | 1.1e-20 | CL0114 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mupr3429g00007 | K25507 | - | gmx:100810345 | 302.753 |