Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3429g00001 ATGGAAGAAGAGGGGCAGCAGGAGGCAAAGAGTCCAAGGCATGGCCCGGAGAAGAGTGAAGCGGTTCGGTCAAGGTGGACTCCCAAGCCTGAACAAATCCTCATTCTTGAGTCCATCTTCAACAGCGGCATGGTTAACCCCCCAAAGGACGAAACCGTCAGAATAAGAAAGCTCCTTGAGAAATTCGGCACCGTCGGTGACGCCAACGTCTTCTACTGGTTCCAGAACCGCCGCTCCAGATCCCGCCGCCGCCAGCGCCAGATGATGCAGCAGGCTGCCGCCGCTGCCACCACCGCTGACCGACCTCAGCCCCAGCCCCAGCCACATCCCCAGCCTCAGCCTCAGCCTCAGCCTCAGACTCAGACTCAGACTCAGCTTCTTGTTGGTGGTGCAATTCCACATGATCACACTCAGGTCAACCTTGTTGCAACTGAAACTGCAACTTCAACCATGGGCTTTGGTTCTTCTCCTTCTTATGATCTCCTTGGCTCCTCTTCGTCATGTGGTACTGGTGTGTTTGCTGGCCATCATGCCATGGATGGTTTCTTTTCAGTTTCTTCTCCTCAATTGGGTTTCCCTGAAATAATTGATCACTCTTCACCCGCATCATCACTTTTCTACCCTTCTCATGATCCAAATTTGAGCTACCACACTGGGGTAGGATATGGGGGCACTAATATTTCAGGATTCATCACAGTGTTTATCAATGGAATTGCAACAGAACTTCCAAAGGGACCAATAGACATCAAAACCTTGTTTGGAGAAGATGTAATGTTAGTTCATTCCTCTGGAGTCCCAATTCCCACCAATGAATTTGGGTTCTTAATGCATAACCTGCACCATGGCGAAAGCTACTTTCTGGTATCAAAGCCAACGCAAATCTGGTTTCGCGCTACAAAGAGTAACATCTTCGTTAGACGGGATGTGAAGCGCTATTGTGATGAGCTAGACTTATTTGGATTAGACATGAAGATACCTTGGTTTATTGAGCAAAAGAGGGGAAGGATGACAATTGTTAACGATCATACACACAGCAAGAAATTTACAAAATTTATTTCTTTTCATGCAAACAGCAATCAATACTCTACCCATGTAGTGGAAAGTGATGAGGCATATGCTGCTGGATACGTGGCGTTTCATCTTCAAAATAATTAA 1155 0.4727 MEEEGQQEAKSPRHGPEKSEAVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGTVGDANVFYWFQNRRSRSRRRQRQMMQQAAAAATTADRPQPQPQPHPQPQPQPQPQTQTQTQLLVGGAIPHDHTQVNLVATETATSTMGFGSSPSYDLLGSSSSCGTGVFAGHHAMDGFFSVSSPQLGFPEIIDHSSPASSLFYPSHDPNLSYHTGVGYGGTNISGFITVFINGIATELPKGPIDIKTLFGEDVMLVHSSGVPIPTNEFGFLMHNLHHGESYFLVSKPTQIWFRATKSNIFVRRDVKRYCDELDLFGLDMKIPWFIEQKRGRMTIVNDHTHSKKFTKFISFHANSNQYSTHVVESDEAYAAGYVAFHLQNN 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3429g00001 384 PANTHER WUSCHEL-RELATED HOMEOBOX 11 1 291 IPR044558 GO:0003700|GO:0048830
Mupr3429g00001 384 SMART HOX_1 21 88 IPR001356 GO:0003677
Mupr3429g00001 384 SUPERFAMILY Homeodomain-like 17 90 IPR009057 -
Mupr3429g00001 384 ProSiteProfiles 'Homeobox' domain profile. 19 84 IPR001356 GO:0003677
Mupr3429g00001 384 MobiDBLite consensus disorder prediction 103 117 - -
Mupr3429g00001 384 MobiDBLite consensus disorder prediction 79 124 - -
Mupr3429g00001 384 MobiDBLite consensus disorder prediction 86 102 - -
Mupr3429g00001 384 Gene3D - 23 90 - -
Mupr3429g00001 384 MobiDBLite consensus disorder prediction 1 28 - -
Mupr3429g00001 384 MobiDBLite consensus disorder prediction 1 25 - -
Mupr3429g00001 384 FunFam WUSCHEL-related homeobox 11 23 90 - -
Mupr3429g00001 384 Pfam Homeodomain 23 83 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3429g00001 Mupr-Chr3429 12758 16174 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3429g00001 15 311 Wox Gene Family AT3G03660 48.052 6.27e-64 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Mupr3429g00001 Homeodomain 1.9e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3429g00001 - - gmx:100791266 360.533