Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3422g00001 ATGAGTAACGGGGAACCTTTGGATTTGTATAAGCTTTTCATGGTGGTGAAGGAGAAAGGTGGTTATGATGCTGTATGTAAGGACAGGTTGTGGGATTTGGTGGGGGAAGAATATGGGTTGGGTGTGAATGTTGGTTCATCTGTGGAACTTGTTTACAGTAAGCACTTGAGTGCTCTAGAGACATGTTTGAAGAATGTTGCTGACGGTAAGTTCCCTGAGTGTGGTTTAGTGGATGATAGAGTTAAATTTCGCAAGTGTTTGATGGAGGTGCAAGCTGAATCCTTGTTGAATGATTCTGGCGAGGAAGAGGCGAGAGATGAACTTGAGAGGAGTGTGTGTGACTGTCCAGATGGGAGGAAGTTGTGTGGTAGTAATAGAGTGAAGGGCGTGAAACCGGAGTCAAATGGGACTGAACTCAAGGGGGTATATGAGCATCAAGATGGGAGGAAGTTGTGTGGTGCTAATACTAATAGAATGAAAGGAAATAATCCAGGTTCTAGTGGGGATGAATTTGATAAGGCATGTGACTATCTAGATGAGAGGAAGTTGTGTGGTACTAATAAGGTGAAGGGTGTGAATCCAGAGTCTAATGTGGCCAAGAAAGCTCATAGTGAAGGACTTATTGATTTGGATATGCTGGACCATGGGATGAATGAGCCTATTCTTGAAAACTTGTGCAACCTTAATACTGAAATGGATATGTTGGAAGAGTCTGAATGGGACAAAATGTTCCTTGTGGATGCATCTGATGCTGAAAGCAACATGGCTAGATTGTCAGATGGAAGCAAGAGTAATGATGATGATGACAATAGTGATGAAGTCTGGATATTGGATCCATCCAGTATTGACAAAGAGAGCTTTGGTTGGAGGAGGAAGAGAGAGTCTAAGTCAGAACTGTTAAGTTGGGTTACTAGCATTGCTAAAAATCCTTGTGATCCTACAGTTGGTTTGATTCCTGAAAAGTCTAAGTGGAAGTCTTACAGTAGTCAGGAAATCTGGAAGCAGGCTTTGTTGTTTCGAGAAGTTGCCTATCTGACGAAAGATTTTAAGACAATAGGTGAACAACTTAATTGGAAGAGTCAGAAAATGCACCCTTCCGTGTATGATAATCGCAATGGGGCAATATACAATCTTAGACAGAGGTTGAAATGTGACAAGAGGGTTTTGAAGGGAAAAACTACATCTGATGGAATCTCTTCAACTTCATCTGGAGGAGCACATGGAGGTTTGAAGGGAGTCCTGAGTCCTCATACCGAAGATCGTTCTGAGAACCCTGACTCCGGTCTTGCATGCTTAAGTCTCGATAGATATACCAGAGTGCACATCCCTGTGGGGCCAAACCATCAAGCCGAAGTGCCAGAATGGACCGGTCTGACTTATGAGAGCGATTCTAAGTGGTTGGGGACCCAAATATGGCCTCCAGAAACTGTAAATTTCAAGCGTCTTCGTTTCGGGAGGGACCCTATCGGAAAGGGAAGAGAGGATTCATGTGGCTGCCAAGTGCAAGGCTCGATTGAGTGCATCCGGATCCATGTGGCTAAGAAAAGGTTGAAGGTTAAGTTGGAATTGGGCGAGGCATTTTACCAATGGAATTTGCACAGGGTAGGTGAAGAAGTTAGGGGTTCATGGACAGAACAAGAGGAGAAGAAGTTCATAGATGTAGTGAACACAAACCCTGCTTCACTTGATAAATGCTTTTGGGATCATCTTTTCATAACATTTCCGATGAAGAGTAGAGAAGATTTGGTCAGCTACTATTTCAACGTCTTCCTTTTGCAGCGCAGAGCTTATCAGAATAGGCATACTCCAGATAACATTGACAGCGATGATGATGAATCAGAATTTACACCATTGAGGAAAATTTTTGGACATCAATCAGGAAAATCTCACAGCTTCATCTTGTTATCCCCAAAAAAAAACAAACGCAAGAGGAAAAATTGCAAGTGA 1947 0.4278 MSNGEPLDLYKLFMVVKEKGGYDAVCKDRLWDLVGEEYGLGVNVGSSVELVYSKHLSALETCLKNVADGKFPECGLVDDRVKFRKCLMEVQAESLLNDSGEEEARDELERSVCDCPDGRKLCGSNRVKGVKPESNGTELKGVYEHQDGRKLCGANTNRMKGNNPGSSGDEFDKACDYLDERKLCGTNKVKGVNPESNVAKKAHSEGLIDLDMLDHGMNEPILENLCNLNTEMDMLEESEWDKMFLVDASDAESNMARLSDGSKSNDDDDNSDEVWILDPSSIDKESFGWRRKRESKSELLSWVTSIAKNPCDPTVGLIPEKSKWKSYSSQEIWKQALLFREVAYLTKDFKTIGEQLNWKSQKMHPSVYDNRNGAIYNLRQRLKCDKRVLKGKTTSDGISSTSSGGAHGGLKGVLSPHTEDRSENPDSGLACLSLDRYTRVHIPVGPNHQAEVPEWTGLTYESDSKWLGTQIWPPETVNFKRLRFGRDPIGKGREDSCGCQVQGSIECIRIHVAKKRLKVKLELGEAFYQWNLHRVGEEVRGSWTEQEEKKFIDVVNTNPASLDKCFWDHLFITFPMKSREDLVSYYFNVFLLQRRAYQNRHTPDNIDSDDDESEFTPLRKIFGHQSGKSHSFILLSPKKNKRKRKNCK 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3422g00001 648 CDD ARID 3 60 - -
Mupr3422g00001 648 CDD SANT 542 590 IPR001005 -
Mupr3422g00001 648 MobiDBLite consensus disorder prediction 392 426 - -
Mupr3422g00001 648 SUPERFAMILY ARID-like 3 73 IPR036431 GO:0003677
Mupr3422g00001 648 ProSiteProfiles ARID domain profile. 1 64 IPR001606 GO:0003677
Mupr3422g00001 648 ProSiteProfiles ELM2 domain profile. 440 591 IPR000949 -
Mupr3422g00001 648 Pfam ARID/BRIGHT DNA binding domain 3 60 IPR001606 GO:0003677
Mupr3422g00001 648 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 2 641 - -
Mupr3422g00001 648 Gene3D - 1 70 IPR036431 GO:0003677
Mupr3422g00001 648 SMART ELM2_2 442 494 IPR000949 -
Mupr3422g00001 648 SMART bright_3 1 65 IPR001606 GO:0003677
Mupr3422g00001 648 SMART ARID_2 1 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3422g00001 Mupr-Chr3422 7861 12584 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Mupr3422g00001 ARID 1.1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3422g00001 - - gmx:102667655 972.23