LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr340g00013	ATGGATATAGCTTTTAGCTTATCGCGGTCTAATGTGGTATTGGATGGTTTGGATTCTTGCATTGTGTTTGGAGGGAGAGGTTTTGGTTGTGCTTTTCTTGGTCACTCGAGGACTATTTCGAAAGCTCGTTTTAGTGGGATGAACAAGATAGGTAGGAGTAGTTCAAGAGTAGAATGCATAGGAGAGTTGAAGGTTTCAAATGGGAAGAGGAGTTTGTCTTGGAAGAATAATAAACTTTTTAGGGGAAATAGGGAAATTTGGTTTAAGTGTCTGGGTAATGATTCTTTATCATATGTCAATGGAAATGGACGGAGTGTTGATAGGGTGGAAGGTGCTGGTGAGGACTCTGCTTTGAGGTCCAATTCCAGTGCTGAATTGGGTGAACCTTTGGGAGAAGGAGAAGAAGGTCAAGGAGGAAGGAAAGAAGTTGGGGGTGAAGTTGAAGTAGAGGTACAAGATGTTGATGAATTGAAAGAACTGTTGCAAAAGGCCATGAAAGAATTAGAAGCTGCTCGAGTTAACAGCATCGTGTTTGAGGAAAAGGTTAAGAAGATATCGGAGACTGCAATTTTTTTGCAGGATGAAGCATCAAGTGCTTGGAACAATGTTACTTCTACCCTTGATATCATCCAAGATATTGTGAGTCAAGAATTTGTTGCCAAAGAAGCTGTTCAGAAAGCAACAATGGCTCTTTCTCTGGCTGAGGCAAGGCTTCAAGTAGCCATAGACTCTTTGAAGGTTACAAAAGAAGTTTATGATTCCCCACAAGGTTCTAACAAGAGTAATGGTGATAAAGATATAATGCAAGAGGAGAAAGAACTTTTGGTTGCTCAGGAAGATATCAAGGAATGTCAGACAGTTTTAGCAAATTGTGAGAATGAGCTGAGAGGCTTGCAGTGTAGAAAGGAGGAGTTGCAGAGTGATGTAAACAAATTGCATGAAGTTGCAGAACAGGCGCAGCTGAAAGCAGCAAAAGCAGAAGAAGATGTCACAAACATAATGCTTTTAGCAGAGCAAGCTGTTGCTGTTGAACTTGAAGCTGCACAATGCATGAATGATGCAGAAATTGCATTACTGAAAGCAGACAAATCTGCCTCTGGTCTTAATGCTGATACCAAAGACACTCTACAAGTACAAGATGGTGTGGCTATTCCCGAGGAAGAGAAAGTGATTCAAGGCTTTTCTGGTGATGATGCTGATAAAAGAGTGGTTGATGTCTCAATTGATGATGAGCCTTTGCTTGCCATGCGATTGCCAGAAACAGAATCTGATAAAACCAGCCAAAGTTTGGAAGGCATGACACAGTCTGATTATCTGAGTGATCATGAGAACGGACAATTAAGCTTAGACTCTTCTAAAGAAAATGAAGTTGTTGAAATAGAGAAGTCAAAGAATGTAGTTCAAACAAAAAAGCAAGAAACACAAAAAGATTTGACTAGAGATAATTCGCCATTTGCTCCCAAGGCATTATTGAAGAAGTCTTCCCGATTTTTTCCAGCATCATTCTTCTCTTTTACTGCAGACGAGACTGATTACACACCGGCATCAGTTTTCCATGATCTTGTGGAGTCTGCATGGAAGCAGTTACCGAAGCTGGTTGTTGGGTTATTGTTAATTGGAGCAGGGGTTGTGTTCTATGCCAATAGAACAGAGAGGGGTGCTCAGCTGCTTCAGCAGCCAGAAGTCATAACAACCACTGTTGAAGAAGTTTCTTCAAGTGCAAAGCCTCTGGTTAGACAACTTCAGGAGCTACCCAGGAGAATTAAGAAAATTATTGCATCATTACCTGATCAAGAGGTGAATGAGGAAGAAGCCTCCCTTTTTGACATGCTCTGGTTACTACTTGCAAGTGTTGTATTTGTACCGATATTTCAAAAGATTCCTGGAGGCAGTCCTGTTCTTGGCTACTTGGCTGCTGGTATCTTGATTGGGCCTTATGGTCTCTCCATCATTCGTCATGTTCATGGGACAAAAGCAATAGCTGAGTTTGGAGTTGTTTTCCTGTTATTCAATATTGGTCTGGAGCTCTCTGTTGAAAGGCTTAGTTCAATGAAGAAATATGTTTTTGGATTAGGCTCTGCTCAGGTTTTGGTGACTGCTGTAGTTGTCGGCTTGGTGGCTCATTATATTTGTGGTCAAGCTGGCCCTGCTGCTATTGTCATTGGGAATGGCCTGGCATTATCATCAACTGCTGTTGTTCTGCAGGTGTTACAGGAGAGAGGTGAGAGCACATCACGGCATGGAAGAGCTACATTTTCCGTTTTGCTTTTTCAGGATTTGGCAGTTGTTGTCTTGCTGATACTCATACCTCTTATTTCTCCTAATTCTTCCAAAGGAGGGGTTGGTTTTCAAGCCATTGCCGAAGCTCTTGGTCTGGCTGCTGTTAAGGCAGTGGTTGCCATTGCAGCCATAATTGCAGGTGGACGATTGCTCCTCCGACCCATATATAAGCAGATTGCAGAAAATCAAAATGCAGAAATATTTTCTGCCAATACACTCTTTGTTATTCTTGGGACTAGCCTTCTCACAGCCAGGGCTGGACTTTCCATGGCATTGGGTGCATTTTTGGCTGGTTTACTACTGGCAGAAACTGAATTTTCCTTACAGGTTGAATCTGATATTGCTCCATATCGTGGCCTTCTACTGGGTCTCTTCTTTATGACGGTTGGAATGTCAATTGATCCAAAACTTCTTGTTTCGAACTTTCCACTCATTACAGGGACCCTGGGACTCTTGATATGTGGCAAGACTTTGTTAGTTACTTTAATCGGCAGAACTTTTGGTATTTCTCTTATTTCTGCCGTTAGAGTAGGTCTTCTTCTTGCTCCTGGAGGAGAATTTGCATTTGTGGCTTTTGGTGAAGCTGTTAATCAGGGAATAATGCCATCCCAGTTGTCCTCCTTGCTGTTTCTTGTTGTGGGAATTTCAATGGCCCTCACTCCATGGCTAGCTGCAGGTGGCCAGCTCCTTGCTTCCCGTTTTGAGCTGCATGATGTTCGAAGTTTATTACCTGTAGAAAGTGAGACAGATGATCTGCAAAATCATATCATTATTTGTGGATTTGGGCGAGTTGGGCAGATCATTGCACAACTTCTTTCTGAGCAACTTATTCCTTTTGTTGCACTAGACGTGAGAAGTGATAGAGTGGCAATTGGGCGTTCCCTGGATCTCCCCGTGTACTTTGGAGACGCTGGTAGTCGAGAGGTCCTACATAAGGTTGGGGCTGAAAGGGCAAGTGCTGCTGCAGTAACTCTAGATTCCCCTGGAGCAAATTATAGAACAGTTTGGGCTCTGAGCAAGCACTTCCCAAACGTGAAGACTTTTGTCCGTGCTCATGATGTTGATCATGGATTGAATTTAGAAAAGGCTGGAGCTACAGCTGTTGTCCCAGAGACCTTGGAACCAAGTCTTCAACTAGCAGCTGCCGTGCTTGCGCAGGCTAAACTTCCTACATCGGAGATTGCAGCAACTATAAATGAATTCAGATCCCGCCATCTGTCTGAGCTCACCGAACTATCTGAAACAAATGGAAGTTCTTTTGGATATGGATATAATAGAATTACGAGCAAACCCAAATCTCAATCCCCAGATTCATCAGATGATACTCAAGCATCTGAAGGGAAACTGGCGACATGA	3636	0.4277	MDIAFSLSRSNVVLDGLDSCIVFGGRGFGCAFLGHSRTISKARFSGMNKIGRSSSRVECIGELKVSNGKRSLSWKNNKLFRGNREIWFKCLGNDSLSYVNGNGRSVDRVEGAGEDSALRSNSSAELGEPLGEGEEGQGGRKEVGGEVEVEVQDVDELKELLQKAMKELEAARVNSIVFEEKVKKISETAIFLQDEASSAWNNVTSTLDIIQDIVSQEFVAKEAVQKATMALSLAEARLQVAIDSLKVTKEVYDSPQGSNKSNGDKDIMQEEKELLVAQEDIKECQTVLANCENELRGLQCRKEELQSDVNKLHEVAEQAQLKAAKAEEDVTNIMLLAEQAVAVELEAAQCMNDAEIALLKADKSASGLNADTKDTLQVQDGVAIPEEEKVIQGFSGDDADKRVVDVSIDDEPLLAMRLPETESDKTSQSLEGMTQSDYLSDHENGQLSLDSSKENEVVEIEKSKNVVQTKKQETQKDLTRDNSPFAPKALLKKSSRFFPASFFSFTADETDYTPASVFHDLVESAWKQLPKLVVGLLLIGAGVVFYANRTERGAQLLQQPEVITTTVEEVSSSAKPLVRQLQELPRRIKKIIASLPDQEVNEEEASLFDMLWLLLASVVFVPIFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLVTAVVVGLVAHYICGQAGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGLAAVKAVVAIAAIIAGGRLLLRPIYKQIAENQNAEIFSANTLFVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLVSNFPLITGTLGLLICGKTLLVTLIGRTFGISLISAVRVGLLLAPGGEFAFVAFGEAVNQGIMPSQLSSLLFLVVGISMALTPWLAAGGQLLASRFELHDVRSLLPVESETDDLQNHIIICGFGRVGQIIAQLLSEQLIPFVALDVRSDRVAIGRSLDLPVYFGDAGSREVLHKVGAERASAAAVTLDSPGANYRTVWALSKHFPNVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQAKLPTSEIAATINEFRSRHLSELTELSETNGSSFGYGYNRITSKPKSQSPDSSDDTQASEGKLAT	1211

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr340g00013	1211	MobiDBLite	consensus disorder prediction	109	145	-	-
	Mupr340g00013	1211	Pfam	TrkA-N domain	1016	1129	IPR003148	GO:0006813
	Mupr340g00013	1211	Coils	Coil	147	174	-	-
	Mupr340g00013	1211	Pfam	Sodium/hydrogen exchanger family	612	983	IPR006153	GO:0006812\|GO:0015297\|GO:0016020\|GO:0055085\|GO:1902600
	Mupr340g00013	1211	ProSiteProfiles	RCK N-terminal domain profile.	1015	1137	IPR003148	GO:0006813
	Mupr340g00013	1211	MobiDBLite	consensus disorder prediction	1179	1211	-	-
	Mupr340g00013	1211	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	1012	1153	IPR036291	-
	Mupr340g00013	1211	Gene3D	-	1011	1175	-	-
	Mupr340g00013	1211	Coils	Coil	274	329	-	-
	Mupr340g00013	1211	Gene3D	-	603	989	IPR038770	-
	Mupr340g00013	1211	PANTHER	K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC	188	1202	-	-
	Mupr340g00013	1211	NCBIfam	monovalent cation:proton antiporter-2 (CPA2) family protein	614	894	IPR004771	GO:0006812\|GO:0008324\|GO:0016020
	Mupr340g00013	1211	FunFam	K(+) efflux antiporter 2 chloroplastic	1011	1175	-	-
	Mupr340g00013	1211	FunFam	K(+) efflux antiporter 2 chloroplastic	603	989	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr340g00013	Mupr-Chr340	84698	98339	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr340g00013	90	1210	Inorganic Solute Cotransporters	AT4G00630	70.246	0.0	1410

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr340g00013	K03455		-	gmx:100791174	1926.75