Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr340g00007 ATGAACAGGTGGGCCGCAATAGCCTCTCAGCTACCAGGAAGAACAGACAACGAGATAAAGAACTTATGGAACACCCACTTGAAGAAGCGTCTCATTTGCATGGGCCTTGACCCACAAACCCACCAGGCACTGGGCTCATCACGGAACCCAAACGACAAGGCCCAGGCGTCATCGACATCAACCCGGCACATGGCCCAGTGGGAGAGTGCAAGGCTGGAAGCAGAGGCCCGGCTCTCAAGGGAATCATCATCATCCATTGCCAACAAAACTGATTCAGACTATTTTCTAAAAATGTGGAACTCTGAAGTTGGAGAATGTTTTCGGAAATCAGATAAGAAAGGTAGCTCCCAAAGTCCCACATCGCTAGGGTCGGTCTCGCAGTCTGCCACTACAACAGATTATGCTTGCAATAGCATTGTCAAAGAAGATATGGAATGGGGTGAAAGAAAAATAGGGTCGGATTCATCAAGCTGTAGTGAACTAGAAGAGTCTAATAAAGTTTGA 504 0.4762 MNRWAAIASQLPGRTDNEIKNLWNTHLKKRLICMGLDPQTHQALGSSRNPNDKAQASSTSTRHMAQWESARLEAEARLSRESSSSIANKTDSDYFLKMWNSEVGECFRKSDKKGSSQSPTSLGSVSQSATTTDYACNSIVKEDMEWGERKIGSDSSSCSELEESNKV 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr340g00007 167 SUPERFAMILY Homeodomain-like 2 35 IPR009057 -
Mupr340g00007 167 MobiDBLite consensus disorder prediction 152 167 - -
Mupr340g00007 167 CDD SANT 1 27 IPR001005 -
Mupr340g00007 167 MobiDBLite consensus disorder prediction 41 66 - -
Mupr340g00007 167 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 31 IPR017930 -
Mupr340g00007 167 MobiDBLite consensus disorder prediction 146 167 - -
Mupr340g00007 167 Gene3D - 1 72 - -
Mupr340g00007 167 MobiDBLite consensus disorder prediction 113 133 - -
Mupr340g00007 167 Pfam Myb-like DNA-binding domain 2 27 IPR001005 -
Mupr340g00007 167 ProSiteProfiles Myb-like domain profile. 1 27 IPR001005 -
Mupr340g00007 167 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 2 133 - -
Mupr340g00007 167 MobiDBLite consensus disorder prediction 108 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr340g00007 Mupr-Chr340 42578 43389 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr340g00007 2 129 MYB Transcription Factor Family AT3G61250 60.145 2.28e-46 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mupr340g00007 Myb_DNA-binding 7.4e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr340g00007 K09422 - gmx:100788528 192.2