Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr340g00006 ATGGGAAGGACACCCTGTTGTGACAAGATGGGCTTGAAGAAGGGTCCTTGGACAGCTGAAGAGGATGAGATTCTTGTCAATTATATCAACAAAAATGGTGGTCATGGAAGTTGGCGTTCTCTTCCCAAGTTAGCAGGTCTTGTTCGTTGTGGTAAGAGTTGCCGGCTAAGATGGACCAACTACCTCAGACCAGATATTAAACGGGGTCCCTTTACCCTTGAGGAAGAAAAACTAATCATACAGCTTCATGGTATCCTTGGAAATAGGTACTTAATGTTGACCAAGAGAGAGAGACACACACAAAATTTTAACATAACTTTCTTAAATGAAAATCCATCATCTCACATGACAAGATCTATTTCCATTCTTTGTGTTTGCTTTCAACTTATACTTAGCTTCATTAAAGAAGTGTTAGGGGTCTTGCAACCCTCCAATGGAAAGTTTTCAGAATTGAAAGTTTTGATACATGAATAA 474 0.3924 MGRTPCCDKMGLKKGPWTAEEDEILVNYINKNGGHGSWRSLPKLAGLVRCGKSCRLRWTNYLRPDIKRGPFTLEEEKLIIQLHGILGNRYLMLTKRERHTQNFNITFLNENPSSHMTRSISILCVCFQLILSFIKEVLGVLQPSNGKFSELKVLIHE 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr340g00006 157 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Mupr340g00006 157 CDD SANT 16 62 IPR001005 -
Mupr340g00006 157 SUPERFAMILY Homeodomain-like 15 91 IPR009057 -
Mupr340g00006 157 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Mupr340g00006 157 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 66 IPR017930 -
Mupr340g00006 157 FunFam Myb transcription factor 11 68 - -
Mupr340g00006 157 Gene3D - 11 68 - -
Mupr340g00006 157 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 91 - -
Mupr340g00006 157 SMART sant 67 110 IPR001005 -
Mupr340g00006 157 SMART sant 13 64 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr340g00006 Mupr-Chr340 40793 42519 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr340g00006 1 96 MYB Transcription Factor Family AT3G61250 79.167 2.08e-54 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mupr340g00006 Myb_DNA-binding 1.4e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr340g00006 K09422 - gmx:100788528 186.808