Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3400g00008 ATGACAAGGGAAGTGGGGAGAGGTGTGAACCACAGAAAGTGGAAGAGAGAAGAAATGAAAGGCTTTTACCGTTCATTGTGTGTTCCTATGGCTTCCACAGCAACAGCAACAGCTCCTCCTCCTCCCCACGTTCTCATCTTAGGAAATGGTCCTCAACCACAAGCTAAGTTCCTTACGACACGAACAACAAACAATAGTACTCGTTTGCAGGTCCAGGCCTCTCGCAGAGCACCCCCTGGAGTTGACACCAGAATCCATTGGGATAACGAAGATGAAGGTTGGGTTGGAGGTACCAATAGCAAACAGAAACCCAATAATAATGTGTTTGGGGATGAATTTGCTCCTTTGCTCACAGCTTCTTTAGGTTCTCATTACGAATTCTTAGGAGTATCACCAGATGCCCATTTAGAGGAAATTAAAGTTGCTTATAGGAAACTGTCAAAGGAGTATCATCCGGACACAACTTCCCTCCCTCTCAAAACTGCCTCAGAAAAATTTATGAAACTAAGAGAGGTTTACCACGTTCTTAGCAATGAAGAGAGTCGAAGATTTTATGATTGGACCCTTGCTCAAGAGGCTGCAAGCCGCCACGCAGAGAAGATGAAAATGAAATTTGAAGATCCTCGCGAGCAACAACTCAACAACTGGAAATCTGTTCCAGACATGGTTGACCGCCTTGGTGGAAAGAATATGAAACTTAGTGATCAGGCAGTTTCTGCCATCACTATTGATTTTTTTATCATTATTTTTTCCATATGTTGCATAATCTATGTACTTATCTTTAAAGTACCATATTACTACTAG 804 0.4241 MTREVGRGVNHRKWKREEMKGFYRSLCVPMASTATATAPPPPHVLILGNGPQPQAKFLTTRTTNNSTRLQVQASRRAPPGVDTRIHWDNEDEGWVGGTNSKQKPNNNVFGDEFAPLLTASLGSHYEFLGVSPDAHLEEIKVAYRKLSKEYHPDTTSLPLKTASEKFMKLREVYHVLSNEESRRFYDWTLAQEAASRHAEKMKMKFEDPREQQLNNWKSVPDMVDRLGGKNMKLSDQAVSAITIDFFIIIFSICCIIYVLIFKVPYYY 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3400g00008 267 SUPERFAMILY Chaperone J-domain 122 192 IPR036869 -
Mupr3400g00008 267 CDD DnaJ 124 178 IPR001623 -
Mupr3400g00008 267 Pfam DnaJ domain 124 186 IPR001623 -
Mupr3400g00008 267 PRINTS DnaJ domain signature 161 181 IPR001623 -
Mupr3400g00008 267 PRINTS DnaJ domain signature 125 143 IPR001623 -
Mupr3400g00008 267 PRINTS DnaJ domain signature 143 158 IPR001623 -
Mupr3400g00008 267 Gene3D DnaJ domain 122 235 IPR036869 -
Mupr3400g00008 267 FunFam DnaJ homolog subfamily C member 4 112 210 - -
Mupr3400g00008 267 ProSiteProfiles dnaJ domain profile. 123 189 IPR001623 -
Mupr3400g00008 267 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT T, CHLOROPLASTIC 63 265 IPR044618 -
Mupr3400g00008 267 SMART dnaj_3 122 181 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3400g00008 Mupr-Chr3400 57015 57906 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3400g00008 124 191 C2H2 Transcription Factor Family AT1G74250 36.111 3.29e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3400g00008 K23051 - gmx:100819309 355.91