Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3392g00004 ATGGTTTGGTTTGGTCACTTTGCAATAGTGATTCATCTAGTAAAGGGCAAACAAAATAAAGAAGACAGCTTTTTCTTACCATCAATTATTGTTCTTTGCAATATGGATACATCAAATCCTGCGGCCTTTGTCAATGCAGAACTGTTGCACTTTTATGTTGGAAGGAGGGTTCGGGCACTAATGCAGGTTATGCGATCTGATGGTGGAGTTGTCATTGGAAAATCAACAGATGAGAAGCAACTAGTTGTAAAAGGATCACCCCCACCTGCTCCTCTTACAAATTTTGTAGAAGTTATTGGTATTGTTAACAGTGATAAGTCAATTGGTGCTGAGATATGGAGCAATTTTGGTGATGCCATTGGTATTGTTTATGAAGCTGTGGATTCTGATGTATTTTTTCCCCTGTTGGCAGATATGATCAGCTACAATAAGCTTTGTCAGCTTGCAAATGGAGAATTTAAACACTTGTTCCTATGTCAAGACACTGTCTAA 492 0.3841 MVWFGHFAIVIHLVKGKQNKEDSFFLPSIIVLCNMDTSNPAAFVNAELLHFYVGRRVRALMQVMRSDGGVVIGKSTDEKQLVVKGSPPPAPLTNFVEVIGIVNSDKSIGAEIWSNFGDAIGIVYEAVDSDVFFPLLADMISYNKLCQLANGEFKHLFLCQDTV 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3392g00004 163 SUPERFAMILY Nucleic acid-binding proteins 39 118 IPR012340 -
Mupr3392g00004 163 Gene3D - 35 161 IPR012340 -
Mupr3392g00004 163 PANTHER REPLICATION PROTEIN A 14 KDA SUBUNIT A-RELATED 33 158 - -
Mupr3392g00004 163 Pfam Replication factor A protein 3 35 153 IPR013970 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3392g00004 Mupr-Chr3392 31757 33595 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3392g00004 35 158 Core DNA Replication Machinery Family AT4G18590 55.645 3.78e-45 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3392g00004 K10740 - gmx:100306641 181.415