Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3387g00007 ATGCGGATGAGCTGCAATGGGTGTCGGGTTCTGAGAAAAGGTTGCAGCGAGAATTGCAGCATCAGACCCTGTTTACAATGGATCAAAAGCCCAGAATCTCAAGCTAATGCTACTGTGTTTCTCGCTAAGTTCTATGGCCGTGCTGGCCTCATGAACCTCGTTAATGCAGGCCCTGAACATCTCCGTCCAGCGATTTTTCGTTCGTTATTGTACGAGGCATGCGGTCGGATAGTGAACCCGATTTACGGTTCGGTGGGTTTGTTATGGTCGGGGAGCTGGCAGCTGTGTCAAGCCGCCGTGGAAAACGTCTTGAAAGGCACGCCGATTACGCCGATCACTTCCGAAGCCGCGGCTAGCGGGCGGGGCCCACCCCTCAAGGCCTACGACATACGTCATGTCTCCAAAGACGAGAACTCGGCCGCGTCTAACGAAACTCAGCAGCGAGTCAAGACTCGGTCGCGGGTGAAGCGATCCCTCGCCAAGCCCAAATCCACCGACGAAGACAACAACAACAATAATAACAAGGGAACCGAATCGGGTTCTGCTGAACCGGGTTTGGTGACGAGCGAGTGGACCGAAGAGGTGTTGAATCGGTCCGGCAGTCACGATTCATCGCTGAGCCACCAGTCGGAGGCGGCGAACGCGGTGGAGAGCGAGAGCATGTTGTCGGTGGAGACTGCGGAGACTTCGGTCCTCTTTCGAGATGAACCGGAGTCGAACCCGAAGCGCGTGGACCGAACCGAAGAGGGTGTTGGTCTTGAGCTTACGCTGGGGTTCGAACCGGCCTCACGTGCGTGTCACGTGGTTCCGGTGAAGAAGAGAAGGATTGAGTTGAAGAATTTTAGCGGCTCTTGCAAGATGGAGCTGGGGCTTGAATACTCGGCTTGA 888 0.5552 MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLVNAGPEHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVENVLKGTPITPITSEAAASGRGPPLKAYDIRHVSKDENSAASNETQQRVKTRSRVKRSLAKPKSTDEDNNNNNNKGTESGSAEPGLVTSEWTEEVLNRSGSHDSSLSHQSEAANAVESESMLSVETAETSVLFRDEPESNPKRVDRTEEGVGLELTLGFEPASRACHVVPVKKRRIELKNFSGSCKMELGLEYSA 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3387g00007 295 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Mupr3387g00007 295 MobiDBLite consensus disorder prediction 134 223 - -
Mupr3387g00007 295 Pfam Lateral organ boundaries (LOB) domain 4 102 IPR004883 -
Mupr3387g00007 295 PIRSF AS2 1 295 IPR017414 -
Mupr3387g00007 295 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 257 - -
Mupr3387g00007 295 MobiDBLite consensus disorder prediction 165 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3387g00007 Mupr-Chr3387 59079 60338 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3387g00007 1 288 AS2 family AT3G02550 57.986 6.72e-106 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mupr3387g00007 LOB 2.2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3387g00007 - - gmx:100807854 497.278