Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3376g00004 ATGGATCCTTATTTTACAACTACATTAGAATCCGACATGCCACTTTCGGACCCTATTCAGCATTATGATGAAGGCAATGGTTTGAACAACAATGTTTTGGTCTCAAACGAGAATTGGTTCTCTGGGGAAAACACAGAGGGTGGTAAAGCACACAAGGAAGTTCCGAGATGGACGAGGTACAAAGGGGTGAGGCGTAGGTCACACGGAAAGTTTGCCGCAGAGATAAAAAACCCAAACAAAAGTGGTAGGGTTTTGCTTGGGACTTATGACACTGAAGAGGAAGCTGCTTTGGCTTATGACAAAGCAGCTTTCAATATTAGAGGCTCCAAAGCCAAACTCAATTTTCCTCACCTCATTCCATCGACCCTGCCATTGGACACACCAAGTAGCCACATCACTCACTCTCCTTCTTCATCTTCCACTTCTCAGGATCCAAAGAAAAGGAAGGGACTCGCTGACCCTAAATGTGATGGTGAATCGGAGAAGATTGTTTTTCGGAGTGAGGATGAAAGCGCTGCGGTGGCGCGTGATGTGCACGCAGCAGCAACGTGGAAGCATTATAGAGGCGTGAGGCGTAGGCCATGGGGGAAGTTCGCGGCAGAGATTAGGGATCCAAAGAAGAATGGAGCTAGGGTTTGGCTTGGAACTTACGATACCGAAGAGAAAGCAGCTTTAGCATATGATAAAGCCGCTTTCAAAATTCGTGGTCAGAAAGCCAAGTTGAATTTTCCTCACCTCATTGACTCTGACGATTCTAATATATTGTCTGAGCCCATGAAAGTAACAACTTCCAAACCAAGGTTGTTGAAAATTCCTCAACCGTTATCCCCATCCTCTCTGTATTCAGATGATAGCTCAGAGTCACAAGGAACTAAGAGGAGGAAGACCCTAGCTGATCTACTCAATAAGTTAGCCAAGAATAGAAGCCAAGCCAAGATTTACTCTCCGCTGGTGATTGCCAAGTTATCGTCAGCACAGTGA 981 0.4557 MDPYFTTTLESDMPLSDPIQHYDEGNGLNNNVLVSNENWFSGENTEGGKAHKEVPRWTRYKGVRRRSHGKFAAEIKNPNKSGRVLLGTYDTEEEAALAYDKAAFNIRGSKAKLNFPHLIPSTLPLDTPSSHITHSPSSSSTSQDPKKRKGLADPKCDGESEKIVFRSEDESAAVARDVHAAATWKHYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYDTEEKAALAYDKAAFKIRGQKAKLNFPHLIDSDDSNILSEPMKVTTSKPRLLKIPQPLSPSSLYSDDSSESQGTKRRKTLADLLNKLAKNRSQAKIYSPLVIAKLSSAQ 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3376g00004 326 MobiDBLite consensus disorder prediction 146 160 - -
Mupr3376g00004 326 MobiDBLite consensus disorder prediction 126 145 - -
Mupr3376g00004 326 Pfam AP2 domain 58 108 IPR001471 GO:0003700|GO:0006355
Mupr3376g00004 326 Pfam AP2 domain 186 236 IPR001471 GO:0003700|GO:0006355
Mupr3376g00004 326 SUPERFAMILY DNA-binding domain 186 245 IPR016177 GO:0003677
Mupr3376g00004 326 CDD AP2 185 246 IPR001471 GO:0003700|GO:0006355
Mupr3376g00004 326 Gene3D AP2/ERF domain 58 117 IPR036955 GO:0003700|GO:0006355
Mupr3376g00004 326 Gene3D AP2/ERF domain 185 245 IPR036955 GO:0003700|GO:0006355
Mupr3376g00004 326 ProSiteProfiles AP2/ERF domain profile. 186 244 IPR001471 GO:0003700|GO:0006355
Mupr3376g00004 326 MobiDBLite consensus disorder prediction 126 160 - -
Mupr3376g00004 326 ProSiteProfiles AP2/ERF domain profile. 59 116 IPR001471 GO:0003700|GO:0006355
Mupr3376g00004 326 FunFam Ethylene-responsive transcription factor 2 58 117 - -
Mupr3376g00004 326 PANTHER DNA-BINDING DOMAIN 176 290 IPR044808 GO:0003700|GO:0009873
Mupr3376g00004 326 PRINTS Ethylene responsive element binding protein signature 226 246 IPR001471 GO:0003700|GO:0006355
Mupr3376g00004 326 PRINTS Ethylene responsive element binding protein signature 187 198 IPR001471 GO:0003700|GO:0006355
Mupr3376g00004 326 CDD AP2 58 118 IPR001471 GO:0003700|GO:0006355
Mupr3376g00004 326 SUPERFAMILY DNA-binding domain 59 117 IPR016177 GO:0003677
Mupr3376g00004 326 MobiDBLite consensus disorder prediction 266 294 - -
Mupr3376g00004 326 SMART rav1_2 59 122 IPR001471 GO:0003700|GO:0006355
Mupr3376g00004 326 SMART rav1_2 186 250 IPR001471 GO:0003700|GO:0006355
Mupr3376g00004 326 FunFam Ethylene-responsive transcription factor 2 185 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3376g00004 Mupr-Chr3376 46370 54637 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3376g00004 186 289 AP2-EREBP Transcription Factor Family AT2G44840 61.538 1.22e-34 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mupr3376g00004 AP2 1.7e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3376g00004 K09286 - gmx:548037 244.973