Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3363g00003 ATGGCGAATTGTTTGATGTTGCTTTCTCGTGGAAGTGAATTTGAGGCCACCTATTCAAGCTCTTCAATGAACAACCGAGTCTTTGAGTGCAAGACATGCAACAGGCAATTCCCTTCATTTCAGGCACTTGGTGGCCACAGGGCTAGTCACAAGAAGCCTAGGTTGATGGCAGGGGACATGGATGCTCAATTGCTTCATGACTCACCCCCAAAGCCTAAGACTCATGAGTGCTCTATTTGTGGCTTGGAGTTTGCTATAGGGCAAGCCTTGGGAGGCCACATGAGGAGGCATAGAGCTGCCAATTTGAATGGAAACGTGCACAATTCCATTACTACGAGCAACAGTAGTGGTGGTAGTATTAGTTTTGATTCTTCACCAAAAACTGAAGCTGGCAACAAAGGAGTTTTGGTTTTGGGGTATATACAGTAA 429 0.4569 MANCLMLLSRGSEFEATYSSSSMNNRVFECKTCNRQFPSFQALGGHRASHKKPRLMAGDMDAQLLHDSPPKPKTHECSICGLEFAIGQALGGHMRRHRAANLNGNVHNSITTSNSSGGSISFDSSPKTEAGNKGVLVLGYIQ 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3363g00003 142 ProSiteProfiles Zinc finger C2H2 type domain profile. 28 55 IPR013087 -
Mupr3363g00003 142 ProSitePatterns Zinc finger C2H2 type domain signature. 30 50 IPR013087 -
Mupr3363g00003 142 ProSiteProfiles Zinc finger C2H2 type domain profile. 75 102 IPR013087 -
Mupr3363g00003 142 Pfam C2H2-type zinc finger 27 53 - -
Mupr3363g00003 142 Pfam C2H2-type zinc finger 75 99 - -
Mupr3363g00003 142 SUPERFAMILY beta-beta-alpha zinc fingers 26 97 IPR036236 -
Mupr3363g00003 142 SMART c2h2final6 75 97 IPR013087 -
Mupr3363g00003 142 SMART c2h2final6 28 50 IPR013087 -
Mupr3363g00003 142 PANTHER ZINC FINGER PROTEIN ZAT5 1 112 - -
Mupr3363g00003 142 ProSitePatterns Zinc finger C2H2 type domain signature. 77 97 IPR013087 -
Mupr3363g00003 142 Gene3D Classic Zinc Finger 26 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3363g00003 Mupr-Chr3363 26935 27890 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3363g00003 1 97 C2H2 Transcription Factor Family AT2G28710 53.922 1.46e-30 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr3363g00003 zf-C2H2_6 6.2e-10 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3363g00003 - - gmx:100781134 245.358