Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3350g00004 ATGGGTGGCCATGACCATCAACAAGAAACAAGGTTTACCATTCTTAGCATCTCTTTGATCCTCCTTATGGTTATTGTGCCTGCGGTGGTGGCTGTTGGTGTAAATAATGGAGGTAAAACAAAAGAAGTAGAAGTGGCTAGCCTTACTACCTTAAACACTGAAAAGAGCAGTGGAGAATCGTTTTGCAAAGAAACAGAGTACCAGGATGCCTGCAAGAAAACCCTTGGGAATTCACTTTTCGTAGTCACAGATCCGAAGAAGCTGATAAAAGCTGGGTTCAATGCAACGGTGATTGAACTTTTAAGCCACGCAAACAACGCCACCCTTTTTCATGAGATGGCCCCGGATAACATGACAAGACGAGCTATGGATATTTGCACGGAAGTATTGGATTATGCGGTTGATGGTATTATCAAATCCACTACGATATTGGACAAATATGAATTAAGCCAGATGAGTGAACACGTTTTTGACCTCAAGGTTTGGCTCACGGGGAGCATCACTCACCAACAAACTTGCATGCAAGGTTTTGAGAACAACGTAACGTTACCAAAGGTCCGCGAGTCAATGGCTAAGGTTTTGAGTGCCTCTGTAGAGCTTAGTAGCAATGCGTTGGATATGGTCAATACTCTCTCTAAAATGCTCAACCATATTAATGACCCGAATAAATTTGCCAATAGGAGACTTCTCTCTGAGGAAACAAAACTTGTGGATGGTTCCCTTTCGTGGGTGGGTCAAGGGCAACGCCGTGGTCTCAAGGCTGCTTTTGGAAGTATTAAGCCCAATGCAGTAGTGGCACAAGATGGGTCCGGCAAATTTAAAACACTCACTCAAGCTCTTAAGACTGTTCCCCCCAAGAATACTAAAACTTTTATTATTCATGTCAAGGCTGGTGTGTACAAAGAAAATGTCAAAGTCACCAAAGACATGACCCATGTCACAATTGTTGGAGATGGTGCTACAAAGACTAAATTCACTGGCAGTTTAAACTTCGTTGATGGTGTCCCAACTTTCGACACTGCTACCTTTAGTGTTCATGGTGCCAACTTCGTGGCCAAGGAAATTGGATTTGAAAACACAGCAGGGCCTAAGAAAAACCAAGCGGTGGCACTTCTAGTAACAGCAGACCAATCTTTGTTCTATAAATGTCAAATAGACGGATATCAAGACACCCTTTTTGCCCAATCCCAACGCCAATTCTACCGTGATTGCGCCATCAGTGGCACCGTCGACTTTATCTTTGGGGACGCCTTTGGAGTATTCCAAAACTGCAAACTAATTGTGAGAGAACCCTTACACGGACAAAAATGCATGGTAACAGCCGGTGGCAGAATCAAAGCTAACGGTCTTAGTGCCCTTGTGTTTCAATCCTGCCAATTCACAGGGGTACCCAAAATGATTTCCGCAAAGCCTAAGTTAGCATATCTTGGAAGGCCATGGATGAAATACTCTAAGGTGGTTATCATCGACTCTCTAATTGATGGTTCCTATTTACCAGAAGGGTACGAGGCATTCTCGGGAGCTGGAAACAAAGACACTTGTACATATTACGAGTATAATAACAAGGGTCCTGGTGCTAGCACAACAGGAAGAGTTAAATGGAAAGGTTATAAGGTCATAACGTCTGCTGAAGCAAAAAATTATTATCCTGGCAAGTTCTTTGAACTTGCTAATTCAGCTGATAAGGATGCTTGGATTACGAAAGCTGGGATACCCTACTCTCTTGGCCCCATGAGTGGTGGCTAA 1746 0.4341 MGGHDHQQETRFTILSISLILLMVIVPAVVAVGVNNGGKTKEVEVASLTTLNTEKSSGESFCKETEYQDACKKTLGNSLFVVTDPKKLIKAGFNATVIELLSHANNATLFHEMAPDNMTRRAMDICTEVLDYAVDGIIKSTTILDKYELSQMSEHVFDLKVWLTGSITHQQTCMQGFENNVTLPKVRESMAKVLSASVELSSNALDMVNTLSKMLNHINDPNKFANRRLLSEETKLVDGSLSWVGQGQRRGLKAAFGSIKPNAVVAQDGSGKFKTLTQALKTVPPKNTKTFIIHVKAGVYKENVKVTKDMTHVTIVGDGATKTKFTGSLNFVDGVPTFDTATFSVHGANFVAKEIGFENTAGPKKNQAVALLVTADQSLFYKCQIDGYQDTLFAQSQRQFYRDCAISGTVDFIFGDAFGVFQNCKLIVREPLHGQKCMVTAGGRIKANGLSALVFQSCQFTGVPKMISAKPKLAYLGRPWMKYSKVVIIDSLIDGSYLPEGYEAFSGAGNKDTCTYYEYNNKGPGASTTGRVKWKGYKVITSAEAKNYYPGKFFELANSADKDAWITKAGIPYSLGPMSGG 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3350g00004 581 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 60 212 IPR035513 -
Mupr3350g00004 581 Gene3D - 259 578 IPR012334 -
Mupr3350g00004 581 PANTHER PECTINESTERASE 21 567 - -
Mupr3350g00004 581 CDD PMEI-like_3 60 213 - -
Mupr3350g00004 581 Gene3D Invertase/pectin methylesterase inhibitor family protein 54 213 IPR035513 -
Mupr3350g00004 581 FunFam Pectinesterase 4 259 577 - -
Mupr3350g00004 581 SMART PMEI_2 53 207 IPR006501 GO:0004857
Mupr3350g00004 581 FunFam Pectinesterase 54 212 - -
Mupr3350g00004 581 Pfam Plant invertase/pectin methylesterase inhibitor 59 207 IPR006501 GO:0004857
Mupr3350g00004 581 Pfam Pectinesterase 262 554 IPR000070 GO:0030599|GO:0042545
Mupr3350g00004 581 NCBIfam pectinesterase inhibitor domain 48 211 IPR006501 GO:0004857
Mupr3350g00004 581 SUPERFAMILY Pectin lyase-like 260 575 IPR011050 -
Mupr3350g00004 581 ProSitePatterns Pectinesterase signature 1. 287 306 IPR018040 -
Mupr3350g00004 581 ProSitePatterns Pectinesterase signature 2. 406 415 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3350g00004 Mupr-Chr3350 11320 13956 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3350g00004 17 573 Carbohydrate Esterase AT5G49180 43.386 1.93e-155 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3350g00004 K01051 - gmx:100785214 739.569