Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr334g00004 ATGAAGTTGCAACTTCTGATCAATCACTTCAAACTCTTTCTTATGAAGATGAACGGTCAGTGGAGGGGAGGAAGGTGCTGGAGAGGGTCCAGGAAACACGACTCTGAATTGAATGGGAATGATTTTGTTTATGATGGTGAAAATACTTCGTTTACACTTAGTTCTCTTGCTTGCAACAAGCTCGAGTTTACAGTTATTCTAGAGCATGTTCAATTGTTGTGTTTGTTAATTCTTCCAATTTTGGCTCACATGAATAGTGGAAACTGCAGTCCTGATGGTAATGGAGAACCAAATGAGAGTGACAAGAAGTGGATCAAGTGCTCCTTTAGAACCGAGACATTTAGAGTTGAGATTAGCTTTGCTTCGAAAATTCCGTTGCAGGCCATTACCAATGCTCTGCGTGGGCAGGAGTTAGAGAATTTTCAAGAAGCAATAAGAGTGCTTACTATAGTTTTGAGGCAAGATGCTGCTAAACAGTGCGTGAATTATGTTGTTTGTTGGTTCGCCAATCATTCTTTCACAATGATCCTAAGAATTTTGTTGACGTGGGGTTTCCATTCCAGCTTTAGAACTACCCAAAGTGGCTTGTCTTTGAACATAGATGTCTCAACGATTATTAAGCCTGGGCCTGTGTTGGACTTCCTTATTTCCAATCAAAATGTGAGAGACCCCTTTCACTTGATTGAGCAAAGGTTTACATTGAAGGTCAAAGGTGGAAGGGATGGTGATGATGCTACTAAAGAAGTGACAGTATATGATTACTTTGTTAATCACCGAAAGACAGATCTCCGCCGCTCTCAAGATCTCCCATGTATCAATGTTGGGAAGCCAAAACATCCTACATACTTTCCTCTTGAGCTTTGCTCTTTGGTATCCCTGCAATGTTATACAAAAGCCTTGTCTACACTTCAAAGGTCTTCATTGGTTGAGAAGTCCAGGCAGAAGACACAGGAGAGGATGAGGGTCTTGTCTGATGTTCTTAAAAGTAGCAATTATGGTTCTGAACCTATGCTTCACAATTGTCGGATTTCTATAAGCTCTAGCTTTACTGAAGTCGGGTTGAAGTTTGGTAATGGGGAGGACTTCAATCCAAGGGATGGGAGGTGGAACTTCAGTAACAAGAAAATTGTTAAGCCAACAAAAATAGAAATATGGGTTGTGGTTAACTTTTTTGCACCCTACAATGTGCGAGGGCTTGTCAGAGATCTCATTAAGTGCGGGCAAATGAAAGGAGTTATCAGCCTTTTGATGTTTTTGAAGAAAATGATCTGTTTAGGTGTGGAGAAGATGTTTGAGTTGATATGGTCTAAATTTGTCGTGCCTCCTCAATTTCTTCTTTGTCTGCTTCCTAAAAGGAAAATTTCTTATCGTTATGGAAGTTGTTTAATTTACTTTTTACTTTTTTACCCCTTTCCTTGTGTCCATGGAAGAAGAAGAATCTTGCCGGAGTATGGAATTGTTACTCAGTTGTTACTATATATTGTAATGGCTCTACGCTTTTTTGTTATTATTCCAATGAATGATGTTAGTGAGTCTCAGTTCAACCAACTTTTAAATATTGAACTTGATCAAATTATTGAGAATGCTACTTGCTATCATGTTCTATTAGATGAGATTGACTTTTTCCAAGATGATTTACATGAGCTTGTTCATTCTTTATCTTATGTGTGTCAAAGGAGCACTATTGTCATTTCTGTTGATAATTTTGATGAGACATCTTTGGGTCATGGTGACGCGTCTGCTCCTCCTGTCCCTAAGTTAAATAATAAGTGGATATTTTCATCGCTTAACAGAATTTTCATATCCGCGAAAAATCTA 1818 0.3867 MKLQLLINHFKLFLMKMNGQWRGGRCWRGSRKHDSELNGNDFVYDGENTSFTLSSLACNKLEFTVILEHVQLLCLLILPILAHMNSGNCSPDGNGEPNESDKKWIKCSFRTETFRVEISFASKIPLQAITNALRGQELENFQEAIRVLTIVLRQDAAKQCVNYVVCWFANHSFTMILRILLTWGFHSSFRTTQSGLSLNIDVSTIIKPGPVLDFLISNQNVRDPFHLIEQRFTLKVKGGRDGDDATKEVTVYDYFVNHRKTDLRRSQDLPCINVGKPKHPTYFPLELCSLVSLQCYTKALSTLQRSSLVEKSRQKTQERMRVLSDVLKSSNYGSEPMLHNCRISISSSFTEVGLKFGNGEDFNPRDGRWNFSNKKIVKPTKIEIWVVVNFFAPYNVRGLVRDLIKCGQMKGVISLLMFLKKMICLGVEKMFELIWSKFVVPPQFLLCLLPKRKISYRYGSCLIYFLLFYPFPCVHGRRRILPEYGIVTQLLLYIVMALRFFVIIPMNDVSESQFNQLLNIELDQIIENATCYHVLLDEIDFFQDDLHELVHSLSYVCQRSTIVISVDNFDETSLGHGDASAPPVPKLNNKWIFSSLNRIFISAKNL 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr334g00004 606 CDD PAZ_argonaute_like 199 291 - -
Mupr334g00004 606 Pfam N-terminal domain of argonaute 32 152 IPR032474 -
Mupr334g00004 606 Gene3D - 351 493 - -
Mupr334g00004 606 Pfam PAZ domain 242 308 IPR003100 GO:0005515
Mupr334g00004 606 Pfam Argonaute linker 1 domain 183 204 IPR014811 -
Mupr334g00004 606 SUPERFAMILY PAZ domain 204 332 IPR036085 GO:0005515
Mupr334g00004 606 Gene3D paz domain 118 294 - -
Mupr334g00004 606 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 4 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr334g00004 Mupr-Chr334 1690 6667 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr334g00004 99 409 Eukaryotic Initiation Factors Gene Family AT5G43810 25.753 9.19e-24 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr334g00004 K11593 - gmx:100779439 530.02