Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3335g00003 ATGATTGGATTTGGCTCGTTTGAAGTTGGAACGCTTATCGAGAAGTTCCGCCTCACTCGCACTGAAGTTCCGAGAATGATTAACAACGGAGTGTGCAGTCTCCGCACGTGCCTCCGTTTCCCGGAGAGACCCCTGCTCCGACAATCTCCGCGGTTGTTCAGTTTCCGGCGGCGGTTTCTCGTTACTGCATCCGAAACCAAGAAGAAAGAGAAGGTGATTGTGATTTCTGGACCCACCGGCTCCGGCAAGAGCCGCCTCGCATTGGAACTCGCAAAGCGCCTCAACGGTGAAATCGTCAGTGCCGATTCCGTCCAGGTATATCGGGGTCTTGATGTTGGATCTGCAAAGCCTTCCCCTAATGATAGAAAGGCGGTACCACATCATCTGGTTGACATACTGCATCCTTCTGAAGATTATTCTGTTGGGCAGTTTTTTGAGGATGGAAGGCAAGCTACAAGATGCATTCTTGACAACGGCCATGTTCCCATAGTTGTTGGAGGCACTGGATTGTTCATATATGGAAAGCCAGATGTACCTAAAGCCTCTCCACAGATTATATCTGAAGCATATAAAGAGTTAGCTGAACTACAGAGGAAGGAAGACTGGGATTCAGCTGTGCAGTTGGTGGTTAAAGCTGGGGATCCAAAGGCCCAACTTCTAACAGTGAATGATTGGTACCGATTACGGCGTAGCCTAGAGATTATTAAGTCTAGTGGATCACCTCCTTCTGCTTTTCGGATACCATATGATTCTTTCAGGGAACAGGCTGAATATAGTGTTGCTGATGGTTCTGAGTCGTCTGATATGAACACTTATGGTGATGCTATGGAAGAAGCCAACTCATCAGAGTTAGAGTATGAGTTTATGTGTTTTTTCCTTTCTAGCCAAAGACTTGACCTCTATAAATCAATTGATTATCGATGTGAAGATATGCTATTAGGAAGGGATGGGATTTTGTCTGAGGCTCAATGGCTTCTTGATACGGGTCTTCATCCAAACTCCAATTCTGCAACAAAAGCAATTGGTTACAGACAAGCAATGGAGTACTTACTGAGATGCAGACAGCAAGGGGGTCAGAGTTCTGTTGGAGAATTTTACCAATTCTTGTCCGAGTTTCAAAAAGCATCACGGAATTTTGCAAAAAGGCAGTTGACATGGTTTCGCAATGAACATATATACCACTGGCTTGATGCTTCTAAACCTCTGGAAACCATTCTCAACTTCATCGATGGTGCATACAATGATTGGAATGGAAGTCTTATTGTTCCTGAACACCTCAGAATGTCGAGAGATATTTCTAATTGCCGAGAAACTACACAACTTAAGTCTTACCGCACCAAAAATAGGCATTTTGTGAACGGGGAAGATTGTTCTTATATTCTGAACTGGATAAGGAAGACGCAAAGGAGCAACCACTGTTGGGCTCGCTCTTAG 1434 0.4477 MIGFGSFEVGTLIEKFRLTRTEVPRMINNGVCSLRTCLRFPERPLLRQSPRLFSFRRRFLVTASETKKKEKVIVISGPTGSGKSRLALELAKRLNGEIVSADSVQVYRGLDVGSAKPSPNDRKAVPHHLVDILHPSEDYSVGQFFEDGRQATRCILDNGHVPIVVGGTGLFIYGKPDVPKASPQIISEAYKELAELQRKEDWDSAVQLVVKAGDPKAQLLTVNDWYRLRRSLEIIKSSGSPPSAFRIPYDSFREQAEYSVADGSESSDMNTYGDAMEEANSSELEYEFMCFFLSSQRLDLYKSIDYRCEDMLLGRDGILSEAQWLLDTGLHPNSNSATKAIGYRQAMEYLLRCRQQGGQSSVGEFYQFLSEFQKASRNFAKRQLTWFRNEHIYHWLDASKPLETILNFIDGAYNDWNGSLIVPEHLRMSRDISNCRETTQLKSYRTKNRHFVNGEDCSYILNWIRKTQRSNHCWARS 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3335g00003 477 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 69 403 IPR039657 -
Mupr3335g00003 477 FunFam tRNA dimethylallyltransferase 9 176 247 - -
Mupr3335g00003 477 Gene3D - 69 457 IPR027417 -
Mupr3335g00003 477 Gene3D - 178 247 - -
Mupr3335g00003 477 Hamap tRNA dimethylallyltransferase [miaA]. 72 407 IPR018022 GO:0008033
Mupr3335g00003 477 Pfam IPP transferase 105 390 - -
Mupr3335g00003 477 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 69 328 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3335g00003 Mupr-Chr3335 22376 29453 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3335g00003 75 350 C2H2 Transcription Factor Family AT2G27760 27.915 4.03e-18 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3335g00003 K00791 - gmx:100808814 790.03