Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3331g00012 ATGTATGGAACTATAGCTGGCGGCGAGGAACCTTCTGGTGAAAATGAAGACGAAGCAGAACTGCGCTATAGATTTTATGAAAGTGCCTCTGCAAGAAAAAGAACCGTGACAGCAGAAGAAAGAGAAAGGGCAATTAATGCAGCAAAAGCATTTGAACCAACTAATCCTTTCTGTCGAGTTGTCCTGCGACCATCCTATTTGTATAGGGGATGCATAATGTATTTGCCTTCCTGCTTTGCAGAAAAGAATCTGAACGGTGTTTCGGGGTTCATTAAACTTCAGTTGTCCAATGGTAGACAGTGGTCGGTTCGCTGCCTCTACAGGGGAGGTCGAGCGAAGTTAAGCCAAGGGTGGTTTGAATTCACATTGGAGAACAATTTGGGGGAAGGTGATGTCTGTGTGTTTGAGCTCCTTAGAGTGAAGGAAGTTGTGCTGCAAGTTACGGTATTCCGTGTTACTGAGGATACAGGGTTGTTGAGCCCTCCTCCTAACCCTATGCAGCAGCCAAGCCAAAATATGAGCCATACTAAACTCTTGAACCCTCACTTGCAGCATCGCGTCAGTACAACCAAATTGGAAAAAGTGTTTCTTACCGGTCTTTGA 603 0.4527 MYGTIAGGEEPSGENEDEAELRYRFYESASARKRTVTAEERERAINAAKAFEPTNPFCRVVLRPSYLYRGCIMYLPSCFAEKNLNGVSGFIKLQLSNGRQWSVRCLYRGGRAKLSQGWFEFTLENNLGEGDVCVFELLRVKEVVLQVTVFRVTEDTGLLSPPPNPMQQPSQNMSHTKLLNPHLQHRVSTTKLEKVFLTGL 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3331g00012 200 ProSiteProfiles B3 DNA-binding domain profile. 58 153 IPR003340 GO:0003677
Mupr3331g00012 200 CDD B3_DNA 56 151 IPR003340 GO:0003677
Mupr3331g00012 200 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 30 157 IPR044837 -
Mupr3331g00012 200 Pfam B3 DNA binding domain 61 151 IPR003340 GO:0003677
Mupr3331g00012 200 SUPERFAMILY DNA-binding pseudobarrel domain 51 152 IPR015300 -
Mupr3331g00012 200 Gene3D - 35 155 IPR015300 -
Mupr3331g00012 200 SMART B3_2 58 153 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3331g00012 Mupr-Chr3331 52335 54611 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3331g00012 17 154 REM Transcription Factor Family AT1G49480 78.261 1.61e-77 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mupr3331g00012 B3 5.8e-17 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3331g00012 - - gmx:100789352 342.813