Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3331g00011 ATGCTGAAAGAGGAAATGAGGAAGGGTGGAGAAGAAGGTGAAGAGGGAGTAGATCTGAGTGTGAAGCAAGAATTCTCCCAAAGTTTTCATCTTTCAATCAAAGGGTTCTTAAAAAATGCTGTGAACCTTTTTCTTCTTCTTTTCTGGTTCCCCAATCACTCTCACACAATGCCTCGCCCTTGTTTCCACAAGCTTGTTCTCCCCACCACTCTCCAATCCAGACAACTGAGGATTCCGGATAATTTTCTGAGAAAATATGGGACCCAGCTTTCTACTATTGCCACCCTCAATGTTCCTGATGGTAGTGTTTGGCGTATAGGATTGAAGAAAGCAGACAACAGAATTTGCTTTGTTGATGGTTGGCAAGACTTTGTTCAACGCTACTCCATTGGCGTTGGATACTTTTTGGTATTCACATATGAAGGGAATTCATCCTTCATTGTTCATATTTTTAATTTGAGTACTTCTGAGGTAAATTATCAATCAGCCATGAGAAACCATAATGAAGGGCCTTGCTTTGCCAATTATCATCATATTTTTGATGAAATGGAAGATGTAGACTCCCTTGATTTGTCGGATTTGTCACCTCCGTACCTTACTCCTGGGCCATTGCAAAACAAGGTTTTTGCTGGATCTGTAGATCAACTGACACCTGGGAAGAGTCATACTCCAGCTTTGCAGAATTTGTTCAATGGTGGATCGAAACTCAATCACGTAAACTGGGGAGATAGTGGGAGTGCTTTTTCTTCAAAGGGTGCCAATTCACAAGGCAATCAGTCAACCACCAGAGACATAGGTGTTCAGTTTAATGCTGTTGAGTTTAAAAGGTCCACTGACGAATTGAAATTGCGTTATTCTAATGAAGAAGCAGTTAATAAAACTGCAAAAAAGAAGCGGAAATCAGATCCCCGTAAGTTTTCTCATCCCAGGTTTTGTTTCTGTCAGGAAATTGAAAAAATGACTTTTTTTTTCTACTAA 978 0.4018 MLKEEMRKGGEEGEEGVDLSVKQEFSQSFHLSIKGFLKNAVNLFLLLFWFPNHSHTMPRPCFHKLVLPTTLQSRQLRIPDNFLRKYGTQLSTIATLNVPDGSVWRIGLKKADNRICFVDGWQDFVQRYSIGVGYFLVFTYEGNSSFIVHIFNLSTSEVNYQSAMRNHNEGPCFANYHHIFDEMEDVDSLDLSDLSPPYLTPGPLQNKVFAGSVDQLTPGKSHTPALQNLFNGGSKLNHVNWGDSGSAFSSKGANSQGNQSTTRDIGVQFNAVEFKRSTDELKLRYSNEEAVNKTAKKKRKSDPRKFSHPRFCFCQEIEKMTFFFY 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3331g00011 325 ProSiteProfiles B3 DNA-binding domain profile. 61 154 IPR003340 GO:0003677
Mupr3331g00011 325 PANTHER B3 DOMAIN-CONTAINING 53 290 - -
Mupr3331g00011 325 SMART B3_2 62 154 IPR003340 GO:0003677
Mupr3331g00011 325 SUPERFAMILY DNA-binding pseudobarrel domain 57 153 IPR015300 -
Mupr3331g00011 325 Pfam B3 DNA binding domain 64 152 IPR003340 GO:0003677
Mupr3331g00011 325 Gene3D - 54 155 IPR015300 -
Mupr3331g00011 325 CDD B3_DNA 60 152 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3331g00011 Mupr-Chr3331 47093 52330 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3331g00011 57 235 B3 DNA Binding Superfamily AT3G18990 44.737 3.14e-46 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mupr3331g00011 B3 7.9e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3331g00011 - - gmx:100806715 434.491