Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3326g00009 ATGGCACTGCTGTGTGGTTCAACTTCCGTGACTCCATTCCTTTCTCACAAGAATGTTGTCACAATCTCCACAAAATCTTCCTTCGTTGGCTTTCAATTGCCACTTCCTAAGCTCACATTATCTTCTTCTATTCGAACCCTTTTACCTGCAACTTCTCGTGTCCGTTGTCAACAGGACTCCGAGTCTTCTACCCTTGTCGCAGAAGAGTCTTCTACTCCTGTCACGGAAGACCCACGCTTCTTGTGCGTCGAACCCGAACCCCGATTCAAAGGCCCGGACATTTGGAACAAGAGCTGGTATCCAAAAGCTGCAGATCATGTGAATACAGAGAAAACATGGTATGTTGTTGATGCTGCGGACAAAGTTCTTGGAAGACTAGCATCGACGATTGCTATTCACATCCGAGGGAAAAACTTAGCAACCTACACCCCCAGTGTGGACATGGGTGCCTTTGTAATTGTGGTAAATGCAGAAAAGGTTGCTGTATCTGGGAAAAAGAGGACCCAAAAGCTTTATAGGAGACACTCTGGACGACCTGGTGGTATGACTGTGGAGACATTTGCCCAACTGCAAAACAGAATTCCTGAAAGAATTATTGAACATGCTGTTCGTGGCATGCTTCCAAAAGGGAGGCTTGGCAGGAGACTATTCACCCACCTGAAGGTTTATAAGGGCCCAGATCATCCACATGCGGCGCAGAAGCCCATTGACTTGCCAATAAGGGATAAGAGAATACAATTGCAGAAATAG 750 0.464 MALLCGSTSVTPFLSHKNVVTISTKSSFVGFQLPLPKLTLSSSIRTLLPATSRVRCQQDSESSTLVAEESSTPVTEDPRFLCVEPEPRFKGPDIWNKSWYPKAADHVNTEKTWYVVDAADKVLGRLASTIAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMTVETFAQLQNRIPERIIEHAVRGMLPKGRLGRRLFTHLKVYKGPDHPHAAQKPIDLPIRDKRIQLQK 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3326g00009 249 CDD Ribosomal_L13 113 226 IPR005822 GO:0003735|GO:0005840|GO:0006412
Mupr3326g00009 249 SUPERFAMILY Ribosomal protein L13 107 240 IPR036899 GO:0003735|GO:0005840|GO:0006412
Mupr3326g00009 249 Gene3D Ribosomal protein L13 102 245 IPR036899 GO:0003735|GO:0005840|GO:0006412
Mupr3326g00009 249 NCBIfam 50S ribosomal protein L13 107 238 IPR005823 GO:0003735|GO:0005840|GO:0006412
Mupr3326g00009 249 Hamap 50S ribosomal protein L13 [rplM]. 113 248 IPR005822 GO:0003735|GO:0005840|GO:0006412
Mupr3326g00009 249 ProSitePatterns Ribosomal protein L13 signature. 203 225 IPR023563 GO:0003735|GO:0005840|GO:0006412
Mupr3326g00009 249 FunFam 50S ribosomal protein L13 97 240 - -
Mupr3326g00009 249 Pfam Ribosomal protein L13 111 229 IPR005822 GO:0003735|GO:0005840|GO:0006412
Mupr3326g00009 249 PANTHER RIBOSOMAL PROTEIN L13 98 244 IPR005822 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3326g00009 115 248 Cytoplasmic Ribosomal Protein Gene Family AT3G07110 31.852 3.03e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3326g00009 K02871 - gmx:100305981 453.366