Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3322g00010 TGGAGTGTACACAATGGAGGAAGCTCACTTTATGAACCAGAACAGTTCTATGAAACTTTCAACTTGGGAACTAGTTTTGCATTTTGGCCTGGCCATGACTCCACAGAAAACATTAACACCTATTTTCCATCAGAAGTTCCAAATACAAATTCTATGTGCTTTTTACGAGGGAGTAGGCCCAGTGCTGACTCGGTAACCAATTTGGGCCACGTGTCCATTGGCATTTCCTTACAAGGGAATGGCGGAAAAATGATGAATGAAAACACTGACCAAGAGTTAGGTCTTGACACAGGGAGAGAGGTTCCTGCTGACATCAGTTTGCAGGCTCACAAAAGAACTAGGAGCTTATTTCAGTTTATAGTTTATAGGTCCCAAAGAACAATAAGGGATGTTAAATCTAAGAATCCAAAATCAGCTTCTATAAGCAACACCGAAGAGGAAGCAAGTCCTGACCCTCAGAGTCAGAGCTTAAGCACCTGGCAGGATTTTACAGCTCTAAAGTTAGGTGGAAAATCAAGATCTAGTAGATATCCTGCAACTGATCCACAGAGCGCGTATGCAAGAAAAAGAAGAGAAAGAATAAATGAAAGGTTGAGAATCCTACAAAGTCTTGTCCCCATTGGAACTAAGGTGGATATCAGCACAATGCTTGAGGAAGCTGTACAATATGTGAAATTTTTACAGCTTCAGATTAAGCTTCTGAGCTCTGCCGATATGTGGATGTATGCTCCCATTGCTTACAATGGAATGAACATTGGCCTGGAACTTAACATCAACGTCACCAAACAACCAAAGAAATGCATAACATAG 810 0.4123 WSVHNGGSSLYEPEQFYETFNLGTSFAFWPGHDSTENINTYFPSEVPNTNSMCFLRGSRPSADSVTNLGHVSIGISLQGNGGKMMNENTDQELGLDTGREVPADISLQAHKRTRSLFQFIVYRSQRTIRDVKSKNPKSASISNTEEEASPDPQSQSLSTWQDFTALKLGGKSRSSRYPATDPQSAYARKRRERINERLRILQSLVPIGTKVDISTMLEEAVQYVKFLQLQIKLLSSADMWMYAPIAYNGMNIGLELNINVTKQPKKCIT 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3322g00010 269 SMART finulus 184 233 IPR011598 GO:0046983
Mupr3322g00010 269 MobiDBLite consensus disorder prediction 170 189 - -
Mupr3322g00010 269 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 182 244 IPR036638 GO:0046983
Mupr3322g00010 269 Pfam Helix-loop-helix DNA-binding domain 188 228 IPR011598 GO:0046983
Mupr3322g00010 269 Gene3D - 181 243 IPR036638 GO:0046983
Mupr3322g00010 269 CDD bHLH_AtIND_like 179 241 - -
Mupr3322g00010 269 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 93 251 - -
Mupr3322g00010 269 MobiDBLite consensus disorder prediction 134 157 - -
Mupr3322g00010 269 MobiDBLite consensus disorder prediction 131 157 - -
Mupr3322g00010 269 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 178 227 IPR011598 GO:0046983
Mupr3322g00010 269 FunFam Basic helix-loop-helix transcription factor 179 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3322g00010 Mupr-Chr3322 58977 60293 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3322g00010 144 254 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 72.414 2.61e-48 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr3322g00010 HLH 1.6e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3322g00010 - - var:108319891 248.054