Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3310g00002 ATGCTGACTCTAAGAATTCATGGATATGCCTTGGCTGTTTTGTCTTGTTTTATCATCCTCATAGCAGCCTCACAAACAGATCCTTCAGAAATAAATGCACTGATAGACATCAAGAAAAGTTTGGTTGATCACATAGACAACCTGAGGAACTGGAATACGGGTGATCCATGTATGGCAAATTGGACTGGGGTTTGGTGTTCTGATATGGAGGAGGCTGATGGTTACTTCCATGTCCACAAGCTCTACTTAATAAATATGAATCTCTCGGGAAGTTTAGCACCCCAGCTTGGTCAGCTATCTCATCTTAAGATACTGTCTTTCATGTGGAACAATTTGACAGGCACGATACCAAAGGAAATTGGAAATATTACATCATTGGAACTCTTGCTACTTAGTGGGAATAAGTTATCTGGTAGTTTACCAGATGAGCTTGGCAACCTTTCGAATTTGGATAGACTCCAAGTTGATGAAAACCAATTGTCAGGTCCTATTCCAGAGTCATTTGCCAACATGGTCAAAGTTAAACATCTCCACATGAATAACAACACGTTCAGAGGTCAACTTCCATCCAAACTTTCAAAGCTGTCCATTCTTATGCATTTGCTTGTGGACAACAATAACTTATCTGGTTATCTTCCATCAGAATTCTCTATGTTACAAAAGTTGAGAATACTTCAACTTGATAACAATAATTTCAGTGGGAATGGCATTCCTTCTACCTATGCAAACTTTTCCAGTCTAGCAAAACTGGACCTTAGCTGGAATCAGTTTTCTGGACATATACCATCAAATAAACTTGCAGACAATATGACAACTATTGATCTATCCAATAATCAACTCAATGGATCAATTCCTCTAAGCTTCTTATACCCTCGTCTTCAAAAATTGTCACTTGAGAACAATTTGCTGTTTGGATCCATCCCTGCTAGCATATGGCAGAACATGGCCTTCAATACTAAAGATAAACTTACAATTAATCTGCAAAACAACTCACTATCGGGCGTTTTGGGAATTCTGAATCCCCCAGCAAATGTTACATTAAGGCTTTCTGGCAATCCAATCTGTAAGAATTCTAACATACAAAGTATTGGTCAATATTGTGGACCTGATGGATATGAAGTTGAAGTAGCCCCAAACCAAAACCCTAAAAATCCAATAACTGTCTGTCTAGTTCAAGATTGTCAAGAAAATTTCTATGAATTATATGCCCCCTCCTTCCCAGTTCCTTGCTTTTGTGCAGCGCCTCTGAGAATTGGATACAGGCTGAAAAGTCCAAGTTTTTCTTACTTTCCTCCCTACATAATTAGTTTTCAATCGTATATAACCAAGTCCTTAAACTTAGACCCCTATCAATTATCAATATATGCTTGGGAAGATGGATATCGCATCACCATGTATTTAGAACTATTTCCTTCGTATGACTCCTACCCAAATATGTTCAATGCAAGTGAGGTTTATCGCATTAGAACCATATTTACTTCATGGCAATTTCCTCCCAATTATTTTTTTGGACCATATGAACTCCTGAATTTCACTCTTCTTGGGCCTTATGCAAATCCTATAGATTCAGAGAGGAGCACTAAAACTAGTAAAGTCGTATTAGTTGCTGTTTTAATAGCAGCTGCTGCTACCTCTAATGTGTCTATTAAACTAGACAGTGTGAAAAATTTTACTTTCAGAGAATTGGCTCTTGCTACTAACAATTTTAGCTGCTCAGCTAAAGTTGGCCAAGGAGGTTATGGAAATGTCTATAAAGGCATTTTATCTGGGAAAACACTCGTGGCCATTAAACGAGCAGCTGAAGGTTCCTTACAAGGCCAAAAAGAGTTTTTGACTGAGATTGAGCTTTTATCAAGGGTACATCATCGAAATCTTGTCTCGCTGATTGGATACTGTGATGAAGAACAGGAGCAGATGCTGGTTTATGAATTCATGCCAAATGGAACCCTAAGGGACTGGATTTCTGGTAAAAGTGAAAAAGCCAAAGAAAGGCAAAATTTTGGTATGGGGTTGAAAATTGCAATGGGTGCAGCCAAAGGCATACTATATCTGCATACAGAGGCTAACCCTCCTATATTCCACCGAGATATTAAAGCAGGCAACATACTTCTAGACTCCAAACTTACAGCGAAAGTGGCTGATTTTGGACTGTCACGGCTTGCACCATGCTTAGGTGAAGAAGACACTGGTACTAAATACGTGTCAACAATTGTGAAGGGAACACCAGGTTACCTGGACCCAGAATATGTGATGACTCATACGTTCTCTGACAAATCTGATGTCTATAGCCTAGGAGTTGTGTTTCTGGAGCTTTTGACGGGCATGCAACCAATATCACGTGGGAAACACATTGTTAATGAGGTGAATGTGGCTTGTCGATCTGGCAAGATATATTCCATTATAGAGAGCAGAATGGGTTCATTTCCATTTGATTGTTTGGACAAGTTCTTAACTCTGGCCCTCAGATGTTGCCAAGACAATCCAGAGGAGAGACCATCAATGCTAGATGTGGTGAGGGAACTAGAAGACCTTGTTGCAATGTTGCCAGAAAGTGAAACTAGTTTCCCAGATGTTACCTTAGACAATTCAGGTGAATTTGCACCCTCATCATCTTCAGGATCTAATGCGGCAAGGGAGGACCAACACAAGTACGCATATGTGTCAGGAAGTAATCTTGTCAGTGGTGTCGCTCCCACCATTGTTCCTCGCTGA 2712 0.3982 MLTLRIHGYALAVLSCFIILIAASQTDPSEINALIDIKKSLVDHIDNLRNWNTGDPCMANWTGVWCSDMEEADGYFHVHKLYLINMNLSGSLAPQLGQLSHLKILSFMWNNLTGTIPKEIGNITSLELLLLSGNKLSGSLPDELGNLSNLDRLQVDENQLSGPIPESFANMVKVKHLHMNNNTFRGQLPSKLSKLSILMHLLVDNNNLSGYLPSEFSMLQKLRILQLDNNNFSGNGIPSTYANFSSLAKLDLSWNQFSGHIPSNKLADNMTTIDLSNNQLNGSIPLSFLYPRLQKLSLENNLLFGSIPASIWQNMAFNTKDKLTINLQNNSLSGVLGILNPPANVTLRLSGNPICKNSNIQSIGQYCGPDGYEVEVAPNQNPKNPITVCLVQDCQENFYELYAPSFPVPCFCAAPLRIGYRLKSPSFSYFPPYIISFQSYITKSLNLDPYQLSIYAWEDGYRITMYLELFPSYDSYPNMFNASEVYRIRTIFTSWQFPPNYFFGPYELLNFTLLGPYANPIDSERSTKTSKVVLVAVLIAAAATSNVSIKLDSVKNFTFRELALATNNFSCSAKVGQGGYGNVYKGILSGKTLVAIKRAAEGSLQGQKEFLTEIELLSRVHHRNLVSLIGYCDEEQEQMLVYEFMPNGTLRDWISGKSEKAKERQNFGMGLKIAMGAAKGILYLHTEANPPIFHRDIKAGNILLDSKLTAKVADFGLSRLAPCLGEEDTGTKYVSTIVKGTPGYLDPEYVMTHTFSDKSDVYSLGVVFLELLTGMQPISRGKHIVNEVNVACRSGKIYSIIESRMGSFPFDCLDKFLTLALRCCQDNPEERPSMLDVVRELEDLVAMLPESETSFPDVTLDNSGEFAPSSSSGSNAAREDQHKYAYVSGSNLVSGVAPTIVPR 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3310g00002 903 Gene3D Ribonuclease Inhibitor 27 192 IPR032675 -
Mupr3310g00002 903 Gene3D Ribonuclease Inhibitor 268 370 IPR032675 -
Mupr3310g00002 903 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Mupr3310g00002 903 SUPERFAMILY L domain-like 25 357 - -
Mupr3310g00002 903 ProSitePatterns Serine/Threonine protein kinases active-site signature. 692 704 IPR008271 GO:0004672|GO:0006468
Mupr3310g00002 903 SUPERFAMILY Protein kinase-like (PK-like) 554 859 IPR011009 -
Mupr3310g00002 903 Pfam Protein kinase domain 572 839 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr3310g00002 903 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Mupr3310g00002 903 Gene3D Ribonuclease Inhibitor 196 267 IPR032675 -
Mupr3310g00002 903 MobiDBLite consensus disorder prediction 859 878 - -
Mupr3310g00002 903 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 645 857 - -
Mupr3310g00002 903 SMART serkin_6 569 845 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr3310g00002 903 Gene3D Phosphorylase Kinase; domain 1 539 644 - -
Mupr3310g00002 903 ProSitePatterns Protein kinases ATP-binding region signature. 575 597 IPR017441 GO:0005524
Mupr3310g00002 903 Gene3D Transferase(Phosphotransferase) domain 1 645 855 - -
Mupr3310g00002 903 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 28 189 - -
Mupr3310g00002 903 FunFam Leucine-rich repeat protein kinase family protein 537 644 - -
Mupr3310g00002 903 PANTHER RECEPTOR-LIKE PROTEIN 55 37 844 - -
Mupr3310g00002 903 MobiDBLite consensus disorder prediction 859 879 - -
Mupr3310g00002 903 CDD STKc_IRAK 575 844 - -
Mupr3310g00002 903 ProSiteProfiles Protein kinase domain profile. 569 845 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3310g00002 Mupr-Chr3310 13146 24488 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3310g00002 5 853 Receptor kinase-like Gene Family AT5G01950 55.226 0.0 947
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Mupr3310g00002 Pkinase 2.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3310g00002 - - gmx:100798809 1434.85