Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3306g00001 ATGCCTGGAAGCTTAAGGAATCTCTCACTACTTTCTTCCAAAATCTTCTCCTTCACCTTGCTTCTCTCATTAAACTCCCTTCTCTTTTTTCCATGTTCTTACTCCCTTAATGAGCAAGGCCAAGCTCTTATAGCATGGAAAAACAGCTTCAACAGCACTTCAGATGTGTTGGTATCATGGAACACTTCATCCTCAAGCCCATGCAACTGGTTTGGGGTGTATTGCAACTCACAAGGGCAAGTGGTGGAGATAAACCTGAAGTCAGTGAACTTGCAAGGTTCATTGCCTTCAAATTTTCAACCTCTCAGCAGGTCCTTGAAGGTTCTTGTCCTCTCATCAACCAACCTCACAGGAAGGGTCCCAAAAGAGATTGGAGACTATCTAGAGCTCACCTTTGTTGACCTCAGTGGAAATTCCCTCTTTGGTGAAATCCCTCAAGAAATTTGCAGCCTAAGCAAACTGCTGAGTTTGTCTCTCCACACAAACTTCCTTCAAGGCAACATTCCATCCAACATTGGCAATCTATCAAGTCTTGTGAACTTGACACTCTATGACAACCACCTCAGTGGTGAAATTCCAAGGAGCATTGGCTACTTAACCAAGCTCCAAGTCTTCAGAGCTGGTGGAAACAAGAACCTCAAGGGTGAGATCCCATGGGAGATTGGAAACTGCACCAACTTGGTCATGCTAGGCCTTGCAGAAACCAGCATTTCAGGAAGCCTTCCTTCTTCAATCAAAATGCTGAAAAGAATCAACACCATAGCCATATACACAACTCTATTGTCAGGCTCCATTCCAGAAGAGATTGGCAATTGCAGTGAGTTGCAGAACCTGTACTTGCATCAGAACTCTATCTCAGGCTCAATACCAAGCCAAATTGGAGAACTCAGCAAGCTTAAGAGTCTGTTTTTATGGCAGAACAATATAGTAGGTACCATCCCTGAAGAGCTTGGAAGCTGCACAGAGATCAAAGTCATAGACTTGTCAGAAAACCTTCTCGCTGGTAGCATACCAAGGAGTTTTGGCAAGCTTTCAAATCTCCAAGAGCTTCAAGTAAGTGTCAACCAGCTCTCAGGTATAATCCCTCCAGAGATTTCAAATTGCACTTCTCTGACTCAACTGGAACTTGACAACAATGCTCTCTCTGGTGAGATTCCTGATCTTATTGGCAACTTGAAAGGCTTAACTCTTTTCTTTGCATGGAAGAACAAGCTAACAGGAAACATCCCAGATAGTCTTTCTGATTGCCAAGAACTTGAGGCAGTTGATCTGTCTTACAACAACTTGATTGGTCCAATCCCCAAACGACTATTTGGGTTGAGGAATCTCACCAAACTGCTGCTTATTTCCAATGATTTGTCAGGCTTTATACCACCTGATATAGGAAATTGCTCAAGCCTCTACAGGCTGAGGTTGAATCACAATAGACTAACAGGTAAAATTCCACCAGAGATTGGCAACTTGAAGAGTTTGGATTTTGTGGACATGAGCAACAATCATCTTGTAGGGGAGATTCCTCCAACACTATCTGGATGCCAGAATCTTGAATTTCTAGACCTTCATTCCAATAGTCTCACTGGTTCTGTTCCAGATTCTCTTCCCAAAAGCCTTCAGTTGATTGACTTGTCAGACAACAGGCTAACAGGTGCATTGAGTCACACCATTGGTTCATTGGTTGAGTTGACCAAACTCAACCTTGGAAACAATCAGATAAGTGGAAGAATCCCAGCAGAGATCTTGTCTTGCACTAAGCTACAGCTTCTGGACCTGGGAAGCAATAGTTTCAATGGAGAAATCCCCAATGAAGTTGGTCTAATTCCTTCACTTGAAATCTCTCTCAATCTTAGCTTCAACCAGTTTTCTGGTAAAATTCCTTCCCAATTCTCTAGTCTTACAAAACTAGGAGTGCTTGATCTCTCACACAACAAGCTCTCAGGGAACTTAGATGCTCTTTCTGACCTTGAGAATCTTGTTTCCTTAAATGTTTCCTTCAATGGCTTCTCTGGTGAGTTGCCTAACACCCTATTCTTCCACAAACTCCCCCTTAGTGATCTTGCTGAAAATCAAGGCCTCTACATTGCTGGAGGTGTTGTAACTCCAGCTGACAGAGGTCATGCTAGATCAGCCATGAAGTTCATTATGTCCATTCTCTTAAGCACCAGTGCAGTACTAGTGCTGCTCACAATCTATGTCTTAGTCAGAACTCACATGGCCAGCAAGGTGCTCATGGAAAATGAAACTTGGGAGATGACTTTGTATCAGAAGCTTGATTTCTCCATTGATGACATTGTCTTGAACTTGACATCAGCCAATGTGATTGGCACTGGAAGCTCAGGAGTTGTGTACAAAGTGATAATTCCAAATGGTGAAACACTGGCAGTTAAGAAGATGTGGTCATCAGAAGAGTCTGGAGCATTCAATTCTGAAATTCAAACATTGGGGTCAATTAGGCACAAGAACATCATCAGGCTTCTGGGGTGGGGATCAAACAAGAACCTGAAGTTGCTGTTTTATGACTACCTCCCTAATGGAAGCCTAAGCTCATTGCTCCATGGATCAGGAAAGGGAAAAGCTGAATGGGAGACAAGATATGATGTTATATTAGGTGTGGCACATGCACTTGCATATTTGCACCATGATTGTTTGCCTGCTATTATTCATGGGGATGTCAAAGCCATGAATGTGTTATTAGGTCCTGGATACCAACCTTACCTTGCTGACTTTGGCCTGGCAAGAATTGCTACTGAAAATGGTGATAATACTAATTCCAAGCCAGTTCAAAGACATTACCTAGCTGGTTCATATGGATACATGGCTCCTGAGCATGCATCACTGCAGCCTATCACGGAAAAGAGTGATGTGTACAGTTTTGGCATGGTTCTACTTGAGGTTCTCACAGGAAGACACCCATTAGATCCAACTCTTCCAGGGGGTGCACCTTTGGTTCAGTGGGTCAGGAACCACTTGGCTTGCAAAGGAGACCCTTCTGACATTCTTGACACAAAGCTGAGAGGGAGGGCTGATCCCACCATGCATGAAATGCTACAAACTCTAGCAGTCTCATTTCTATGTGTAAGCACTAGAGCTGATGACAGACCAACAATGAAGGATGTTGTTGCAATGCTCAAGGAAATTAGACCCCTTGACACCTCAAGGTCAGATCCTGATGTATTCAAGGGAGGTTTAACAACACATACTTCACCTCCACCTCCTAAGAATGTGGTCTCACGTGGATCTTCTACATGCTCCTATAATTTCTCAGACAACTCAATCAGTTGA 3279 0.4328 MPGSLRNLSLLSSKIFSFTLLLSLNSLLFFPCSYSLNEQGQALIAWKNSFNSTSDVLVSWNTSSSSPCNWFGVYCNSQGQVVEINLKSVNLQGSLPSNFQPLSRSLKVLVLSSTNLTGRVPKEIGDYLELTFVDLSGNSLFGEIPQEICSLSKLLSLSLHTNFLQGNIPSNIGNLSSLVNLTLYDNHLSGEIPRSIGYLTKLQVFRAGGNKNLKGEIPWEIGNCTNLVMLGLAETSISGSLPSSIKMLKRINTIAIYTTLLSGSIPEEIGNCSELQNLYLHQNSISGSIPSQIGELSKLKSLFLWQNNIVGTIPEELGSCTEIKVIDLSENLLAGSIPRSFGKLSNLQELQVSVNQLSGIIPPEISNCTSLTQLELDNNALSGEIPDLIGNLKGLTLFFAWKNKLTGNIPDSLSDCQELEAVDLSYNNLIGPIPKRLFGLRNLTKLLLISNDLSGFIPPDIGNCSSLYRLRLNHNRLTGKIPPEIGNLKSLDFVDMSNNHLVGEIPPTLSGCQNLEFLDLHSNSLTGSVPDSLPKSLQLIDLSDNRLTGALSHTIGSLVELTKLNLGNNQISGRIPAEILSCTKLQLLDLGSNSFNGEIPNEVGLIPSLEISLNLSFNQFSGKIPSQFSSLTKLGVLDLSHNKLSGNLDALSDLENLVSLNVSFNGFSGELPNTLFFHKLPLSDLAENQGLYIAGGVVTPADRGHARSAMKFIMSILLSTSAVLVLLTIYVLVRTHMASKVLMENETWEMTLYQKLDFSIDDIVLNLTSANVIGTGSSGVVYKVIIPNGETLAVKKMWSSEESGAFNSEIQTLGSIRHKNIIRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGSGKGKAEWETRYDVILGVAHALAYLHHDCLPAIIHGDVKAMNVLLGPGYQPYLADFGLARIATENGDNTNSKPVQRHYLAGSYGYMAPEHASLQPITEKSDVYSFGMVLLEVLTGRHPLDPTLPGGAPLVQWVRNHLACKGDPSDILDTKLRGRADPTMHEMLQTLAVSFLCVSTRADDRPTMKDVVAMLKEIRPLDTSRSDPDVFKGGLTTHTSPPPPKNVVSRGSSTCSYNFSDNSIS 1092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3306g00001 1092 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 736 840 - -
Mupr3306g00001 1092 SUPERFAMILY RNI-like 289 658 - -
Mupr3306g00001 1092 FunFam Predicted protein 195 291 - -
Mupr3306g00001 1092 Gene3D Transferase(Phosphotransferase) domain 1 841 1057 - -
Mupr3306g00001 1092 Gene3D Ribonuclease Inhibitor 612 695 IPR032675 -
Mupr3306g00001 1092 Gene3D Ribonuclease Inhibitor 338 434 IPR032675 -
Mupr3306g00001 1092 Gene3D Ribonuclease Inhibitor 435 533 IPR032675 -
Mupr3306g00001 1092 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 308 1042 - -
Mupr3306g00001 1092 FunFam Leucine-rich receptor-like protein kinase family protein 36 194 - -
Mupr3306g00001 1092 Pfam Protein kinase domain 770 972 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr3306g00001 1092 ProSiteProfiles Protein kinase domain profile. 767 1045 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr3306g00001 1092 Pfam Leucine rich repeat 612 666 IPR001611 GO:0005515
Mupr3306g00001 1092 Pfam Leucine rich repeat 298 357 IPR001611 GO:0005515
Mupr3306g00001 1092 Pfam Leucine rich repeat 536 594 IPR001611 GO:0005515
Mupr3306g00001 1092 ProSiteProfiles Leucine-rich repeat profile. 633 655 IPR001611 GO:0005515
Mupr3306g00001 1092 SMART serkin_6 767 1023 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr3306g00001 1092 SMART LRR_typ_2 175 199 IPR003591 -
Mupr3306g00001 1092 SMART LRR_typ_2 344 368 IPR003591 -
Mupr3306g00001 1092 SMART LRR_typ_2 440 464 IPR003591 -
Mupr3306g00001 1092 SMART LRR_typ_2 631 653 IPR003591 -
Mupr3306g00001 1092 SMART LRR_typ_2 558 582 IPR003591 -
Mupr3306g00001 1092 SMART LRR_typ_2 654 678 IPR003591 -
Mupr3306g00001 1092 SMART LRR_typ_2 296 320 IPR003591 -
Mupr3306g00001 1092 SMART LRR_typ_2 488 512 IPR003591 -
Mupr3306g00001 1092 SUPERFAMILY RNI-like 83 383 - -
Mupr3306g00001 1092 ProSitePatterns Protein kinases ATP-binding region signature. 773 796 IPR017441 GO:0005524
Mupr3306g00001 1092 FunFam Leucine-rich receptor-like protein kinase family protein 339 611 - -
Mupr3306g00001 1092 Gene3D Ribonuclease Inhibitor 31 92 IPR032675 -
Mupr3306g00001 1092 Gene3D Ribonuclease Inhibitor 93 337 IPR032675 -
Mupr3306g00001 1092 Pfam Leucine rich repeat N-terminal domain 37 76 IPR013210 -
Mupr3306g00001 1092 MobiDBLite consensus disorder prediction 1050 1079 - -
Mupr3306g00001 1092 SUPERFAMILY Protein kinase-like (PK-like) 765 1042 IPR011009 -
Mupr3306g00001 1092 Gene3D Ribonuclease Inhibitor 534 611 IPR032675 -
Mupr3306g00001 1092 Gene3D Phosphorylase Kinase; domain 1 732 840 - -
Mupr3306g00001 1092 PRINTS Leucine-rich repeat signature 631 644 - -
Mupr3306g00001 1092 PRINTS Leucine-rich repeat signature 537 550 - -
Mupr3306g00001 1092 FunFam Putative LRR receptor-like serine/threonine-protein kinase 612 697 - -
Mupr3306g00001 1092 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 841 1059 - -
Mupr3306g00001 1092 ProSitePatterns Serine/Threonine protein kinases active-site signature. 885 897 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3306g00001 Mupr-Chr3306 3330 7094 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3306g00001 30 1091 Receptor kinase-like Gene Family AT5G56040 67.570 0.0 1429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mupr3306g00001 Pkinase 5.6e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3306g00001 - - gmx:100802880 1970.67