Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3296g00001 ATGGAGAGAATGTTCCCTCCAAAGAAGCCTTCAACTATGAATTCCCATGACAGACCCATGTGTGTTCAAGGGGACTCGGGTCTTGTCCTCACTACTGACCCAAAGCCTCGCCTCCGTTGGACTGTTGAGCTCCATGAACGCTTTGTTGATGCTGTTACTCAGCTTGGAGGGCCTGATAAGGCCACTCCTAAAACCATCATGAGGGTTATGGGTGTGAAGGGTCTCACCCTTTACCACCTCAAGAGCCACCTTCAGAAATTTAGGCTTGGCAAGCAGCCCCACAAGGACTTCAATGATCACTCGATTAAGGATGCTTCGGCTTTAGAACTGCAACGAAATACTGCTTCCTCTTCTGCCATGATTGGCCGCAACATGAATGAGATGCAAATAGAGGTGCAGAGAAGACTGCATGAACAACTTGAGGTTCAAAAACACCTTCAGCTAAGGATTGAGGCGCAAGGGAAATACATGCAGAGCATATTGGAGAAGGCTTATCAAACACTTGCTGGTGAAAACATGGCTGCCACTAACTTAAAGGGTTCTATTGGACCCCATCAAGGAATCCCTGACATGGGAGTGATGAAGGAGTTTGGTTCCCCTCTTGGTTTTTCTTCTTTTCAAGATCTTGACAATATTTATGGAGGTGACCAAATTGACCTTCAGCAGAACATGGAGAAGCCAGCCCTTGATCATGGGTTTATGCCAATGAATGAGAGTTTGTGTCTGGGGAAGAAGAGGACGTCCAACCCTTATAGTGGGAGTGGGAAGAGCCCTTTGATTTGGAGTGATGATCTCAGGCTTCAAGATTTGGGGGGGCCAGCCTCATCATGCCTTGGCCCTCAAGATGACCCTTTCAAAGGTGACCAGATTCAGATTGCACCACCAGGATCATTGGATAGAGGCACTAATGACATTGATCCCATGTCAGAGATCTATGACTCAAAGCCTGTGCTTCAGGGTGAAGCTGTAGTGGGGGAAAAAAAGTTTGATGCATCTATGAAGCTTGAAAGGCCATCACCAAGAAGAGCACCTCTTCAGGCTGAAAGGATGAGTCCTATGATCAGTACTGGTACCTTGGCACAAGGTAGAGGCTCACCATTTGGAGAGAAGGTTCATCAAAGTTGCATCCAGTTCAGGTAA 1140 0.4711 MERMFPPKKPSTMNSHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKDFNDHSIKDASALELQRNTASSSAMIGRNMNEMQIEVQRRLHEQLEVQKHLQLRIEAQGKYMQSILEKAYQTLAGENMAATNLKGSIGPHQGIPDMGVMKEFGSPLGFSSFQDLDNIYGGDQIDLQQNMEKPALDHGFMPMNESLCLGKKRTSNPYSGSGKSPLIWSDDLRLQDLGGPASSCLGPQDDPFKGDQIQIAPPGSLDRGTNDIDPMSEIYDSKPVLQGEAVVGEKKFDASMKLERPSPRRAPLQAERMSPMISTGTLAQGRGSPFGEKVHQSCIQFR 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3296g00001 379 Gene3D - 34 92 - -
Mupr3296g00001 379 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 12 177 IPR044848 GO:0003700
Mupr3296g00001 379 Pfam MYB-CC type transfactor, LHEQLE motif 128 167 IPR025756 -
Mupr3296g00001 379 Pfam Myb-like DNA-binding domain 38 86 IPR001005 -
Mupr3296g00001 379 MobiDBLite consensus disorder prediction 1 20 - -
Mupr3296g00001 379 SUPERFAMILY Homeodomain-like 34 90 IPR009057 -
Mupr3296g00001 379 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 92 IPR017930 -
Mupr3296g00001 379 FunFam Myb family transcription factor 34 92 - -
Mupr3296g00001 379 NCBIfam myb-like DNA-binding domain, SHAQKYF class 35 90 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3296g00001 Mupr-Chr3296 8544 11411 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3296g00001 4 368 G2-like Transcription Factor Family AT1G79430 56.736 4.08e-121 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mupr3296g00001 Myb_DNA-binding 2.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3296g00001 - - gmx:100793303 686.411