Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3292g00002 ATGGCTAGTGTCTTTTCTGCATGTTCAGGTTCTGCTGTTCTTTTTCACAGCAGATGCTTCTTCCCCTTTGCAGCCAAAGGGCCTCTCTTCCACCTCAAAAGGCCTCCATCTGCTAACTGTGTAGCAGCTTCTTTGGGAACTGAGATATCAGTGCCTCCAGCAGTTGACACTTTCTGGCAGTGGCTCAAGGAGGAAGGTGTTGTCTCTGGCAAGACCCCAGTGAAGCCTGGTGTGGTGCCAGAAGGCCTAGGACTTGTTGCACTCAAAGACATCTCTAGGAATGAGGTTGTCTTGCAGGTGCCAAAGAGGCTCTGGATTAACCCTGATGCTGTGGCAGCTTCAGAGATTGGGAAAGTGTGCAGTGGATTGAAGCCTTGGTTGGCTGTTGCACTGTTTCTCATAAGAGAGAGGGCAAGGGGTGATGATTCTCTTTGGAAGCACTACTTCAGCATTCTGCCTAGGGAAACTGACTCTACTATATATTGGTCAGAGGAGGAGCTCTCAGAGCTGCAAGGGACTCAACTTCTGAGCACAACACGGAGTGTAAAAGAGTATGTGCAGAATGAATTTAGGAGACTGGAAGAAGAAATTATACTTCCTAATAAGAAGCTTTTCCCTTCTCCTATTACACTCGAGGACTTCTTCTGGGCATTTGGAATTCTAAGATCACGGGCATTTTCTCGCCTTCGCAATGAAAATCTAGTTGTGATTCCATTAGCTGACTTGATAAACCATAGTGCCAGAGTAACTACAGAAGATCATGCTTATGAAATTAAAGGAGCAGCAGGTCTTTTCTCCTGGGATTACCTGTTCTCCCTAAGGAGCCCCCTTTCTCTCAAGGCTGGGGACCAGGTATATATCCAATATGATTTAAACAAAAGCAACGCGGAGTTGGCTCTGGACTACGGTTTCATTGAACCAAATGCAGATCGGAATGCATATACCTTGACACTGCAGATATCTGAGTCGGATCCCTTTTTTGGTGACAAACTAGACATTGCTGAGTCCAATGGTTTTGGTGAGACAGCATACTTTGACATCTTCTACAACCGCCCCCTTCCACCAGGGTTACTTCCATATCTGAGACTAGTAGCTTTAGGGGGCACTGATGCTTTCCTATTGGAGTCAATATTTAGAAACTCCATTTGGGGTCATCTTGAATTGCCAGTGAGCCGTGACAATGAGGAGCTAATATGCCGAGTGGTTAGAGAGACTTGCAAAACTGCCCTGGCTAGTTATCATACAACCATTGAAGAGGACCAAAAGTTAAAAGAAGCAAAGTTGGATTCAAGGCTTGCTATGGCAGTTGGAATTAGAGAAGGGGAGAAGAAGCTCCTGCAGCAAATTGACGAGATCTTCAAGGAGAAAGAATTAGAATTGGCCCAGTTAGAATATTATCAAGAAAGGAGGCTCAAGGACCTTGGACTTTGCGGGGAAAATGGTGATATCCTTGGGGACCTTGGAAAATTCTTCTAG 1476 0.4546 MASVFSACSGSAVLFHSRCFFPFAAKGPLFHLKRPPSANCVAASLGTEISVPPAVDTFWQWLKEEGVVSGKTPVKPGVVPEGLGLVALKDISRNEVVLQVPKRLWINPDAVAASEIGKVCSGLKPWLAVALFLIRERARGDDSLWKHYFSILPRETDSTIYWSEEELSELQGTQLLSTTRSVKEYVQNEFRRLEEEIILPNKKLFPSPITLEDFFWAFGILRSRAFSRLRNENLVVIPLADLINHSARVTTEDHAYEIKGAAGLFSWDYLFSLRSPLSLKAGDQVYIQYDLNKSNAELALDYGFIEPNADRNAYTLTLQISESDPFFGDKLDIAESNGFGETAYFDIFYNRPLPPGLLPYLRLVALGGTDAFLLESIFRNSIWGHLELPVSRDNEELICRVVRETCKTALASYHTTIEEDQKLKEAKLDSRLAMAVGIREGEKKLLQQIDEIFKEKELELAQLEYYQERRLKDLGLCGENGDILGDLGKFF 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3292g00002 491 SMART set_7 70 296 IPR001214 GO:0005515
Mupr3292g00002 491 CDD SET_RBCMT 66 305 IPR044431 GO:0016279|GO:0018022
Mupr3292g00002 491 PIRSF RMT_SET 1 490 IPR011192 GO:0009507|GO:0030785
Mupr3292g00002 491 FunFam Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic 306 470 - -
Mupr3292g00002 491 Gene3D set domain protein methyltransferase, domain 1 51 305 - -
Mupr3292g00002 491 Pfam SET domain 82 289 IPR001214 GO:0005515
Mupr3292g00002 491 FunFam Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic 51 304 - -
Mupr3292g00002 491 ProSiteProfiles SET domain profile. 65 290 IPR001214 GO:0005515
Mupr3292g00002 491 SUPERFAMILY SET domain 53 310 IPR046341 -
Mupr3292g00002 491 Gene3D - 306 470 IPR036464 -
Mupr3292g00002 491 Pfam Rubisco LSMT substrate-binding 322 446 IPR015353 -
Mupr3292g00002 491 ProSiteProfiles Plant LSMT protein-lysine methyltransferase family profile. 15 489 IPR011192 GO:0009507|GO:0030785
Mupr3292g00002 491 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 54 437 - -
Mupr3292g00002 491 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 313 484 IPR036464 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3292g00002 58 245 NAC Transcription Factor Family AT3G56570 25.773 1.74e-10 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mupr3292g00002 SET 2e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3292g00002 K00592 - gmx:100818113 893.264