Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3286g00002 ATGTACGAAGAAAGCGGTTGCTTTGATCCCAATGCAATGATGGAACAGGGCAGAGGAGAAGACTGCTTCCCCGAAATGGTTTCAGAGTCAGAGGCCACACTTGAGGCAGTTATGTCTGCCACTGCCACTGCCACTGCCACAGCCACAGCCACAGCCACAGCCACACACAGCCGCAACACCTTTGAGGTGGAAAACTTACCCTACTCGTATTCCAGCGGAGAAGATGCTGTAAATAGAGTTGCCAAAGCAATGGAGATCATTGCATATCCCCAACAACATCCATACAACTTGAACACTCAGTTTGTGGAAGTGGTAAACCATGAGCAGGATCAGCAATTTCCTTATCTCACACCAACACCAGATCTCCTTAACCTTCTCCACTTGCCAATAACCCCAGCTGGGAACTCCTATGAAACCTCTGCCCCAATGGGAACAACAGCAGACAGCACAAATGTCTCCTCAATCTCCTATGACCCTTTCTTGCATTTGAACCTGCAAGCACCTCCTCCCCAGGCTTCACTCAGAGATCAGTTCCTTCCACACATGCCATCTCTTAGAAACGATTTTGTTGCCTTAGGGGGAGGGGATGACATTAGAGGCACTGGAGTTGCCTATCAAGACTTTGGAAACGGACTCGTCGAGTTCGCTGAAGATGTCACTTATGTAGCCAAAAAGAGAGGGGGTAAAAGGACCAAGCACTTTACCAGCACCACTGAGAGACAAAGGAGAGTGGATTTGAGTAGCAAATTTGACGCTTTGAAAGAACTCATCCCAAACCCCTCCAAGAGTGATAGAGCATCCGTCGTGGGAGACGCTATTGATTATATTAGAGAGCTTCTGCGGACAGTAAACGAACTCAAATTATTGGCGGAGAAGAAAAGGCTGACTATGCGGCACAAGGTAGAAACTGAAGGTGACTCCAAGGTAGAAACAATTGGAGACCCACATGATCCTTCCTACCCTGAAAGCTTGAGGAGTTCCTGGATACAAAGAAAATCCAAAGACACCGAGGTTGATGTGCGCATTGTTGATAACGAGGTAACAATTAAGCTTGTTCAAAGAAAGAAGATCGATTGCTTGGTGCATGTCTCACAGGTTCTGGATGAACTTAACCTGGATCTCCAACATGTTGCCGGTGGTCACATTGGCGATTTCTGCAGCTTTCTCTTCAATACCAAGATATGCGAAGGTTCCTCAGTTTATGCGAGTGCCATAGCCAACAAGCTCATTGAGGTCATGGACACAAGTTTGGTAGCAGCATGA 1263 0.4711 MYEESGCFDPNAMMEQGRGEDCFPEMVSESEATLEAVMSATATATATATATATATHSRNTFEVENLPYSYSSGEDAVNRVAKAMEIIAYPQQHPYNLNTQFVEVVNHEQDQQFPYLTPTPDLLNLLHLPITPAGNSYETSAPMGTTADSTNVSSISYDPFLHLNLQAPPPQASLRDQFLPHMPSLRNDFVALGGGDDIRGTGVAYQDFGNGLVEFAEDVTYVAKKRGGKRTKHFTSTTERQRRVDLSSKFDALKELIPNPSKSDRASVVGDAIDYIRELLRTVNELKLLAEKKRLTMRHKVETEGDSKVETIGDPHDPSYPESLRSSWIQRKSKDTEVDVRIVDNEVTIKLVQRKKIDCLVHVSQVLDELNLDLQHVAGGHIGDFCSFLFNTKICEGSSVYASAIANKLIEVMDTSLVAA 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3286g00002 420 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 230 279 IPR011598 GO:0046983
Mupr3286g00002 420 PANTHER TRANSCRIPTION FACTOR BHLH91 1 418 IPR045895 GO:0006355|GO:0048658
Mupr3286g00002 420 Pfam Helix-loop-helix DNA-binding domain 237 279 IPR011598 GO:0046983
Mupr3286g00002 420 Gene3D - 225 304 IPR036638 GO:0046983
Mupr3286g00002 420 SMART finulus 236 285 IPR011598 GO:0046983
Mupr3286g00002 420 MobiDBLite consensus disorder prediction 306 326 - -
Mupr3286g00002 420 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 230 297 IPR036638 GO:0046983
Mupr3286g00002 420 CDD bHLH_AtMYC1_like 235 300 IPR045896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3286g00002 Mupr-Chr3286 5676 7108 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3286g00002 1 420 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31210 39.606 5.33e-83 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr3286g00002 HLH 3.2e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3286g00002 - - vra:106767981 515.768