Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3275g00006 ATGTTTCCTTCCAGTAATTACACCTCCTCGGGCTCTTACCCTCGTTTCCCATCTTCTTCTTCTTCTTCTACTTCACCTTACCCTTCTTTTACTTTCCTTCACCCTGAAAATTCTTCTGGCAGCAACATCTTTCATCACGATCCACTCGCTGTTGCCTACATACCCTCTCATTACCATGCTCCAATTCCCGAAACACTAGCCAATTGGGCAGTTGCAGACTGTGCTGCAATGCTCAATCAGGATCTCGGCGGTGCCCTTAGTGGCATCACCAAGAAACCAGCGAAGAAAACAACCAAGAAAGACAGGCACAGCAAGATTCACACATCTCAGGGTTTGAGGGACCGAAGGGTGAGGTTGTCCATAGAGATCGCACGCAAGTTCTTCGATCTTCAAGACATGTTAGGGTTTGACAAAGCCAGCAACACCCTTGACTGGCTCTTCACGAAGTCCAAGAAGGCAATTAAGGAGCTAACTCGAAGCAAGCACAGTGTTGATAGCTTCGAATTCTCCTCATCTTCCGAGGGTGAAGTGGTTTCTATGATCCACCAAGACCTACAACAACAAGGGGTAGATTTGGAAGAGAGGAAGTTCAAAGAACCTTCTTATTGTGTTAGAGCAAAGATGAAGGAATCAAGGGAAAAAGCAAGGGCAAGAGCAAGGGAAAGGACTAGTAGCAAGATATTGAGCAACATAAGTAGTGGGGAAGGGAAGGTGCAAGAGTTTAAGAAAAAGTGCCCTGCAACTGAAAATTCTCAAATCCTGAACCAATTAAGGTCACCCCTTCAACCTCATCCTCAAGATGTGGGTGGTGAAGTGCCAAGAGATGGTGATTTGAATATTATTGAGGAATCCATTGTCATCAAGAGAAAGTTGAAACACACTCTGATGTCTTCCGTTCATCACCAAAACGCTGTGATCCCTAAGGAAGCAAGTGTAAATCACAGTGACTACCACTCCTTCCCCAATTTTTCTCCAAATTGGGAAGCTAATAGTGGTTCCACTGGACGCTCCACCTTTTGTGCAATAGCCAGCATGAATCTATCTACAGATCAGCCAAGGGCATGTGACAGTTGGCAGAAAAGGGTGCTGCGTATATCTATTGTGAGAGAAAATCGACAACAATATGTATTTCTTGTTGGCCACAATGAGCAGGCTTATGTAAGACTTGGCTGCATCAAGTACCGAAGATATATTCACACATCAGATTAA 1209 0.4458 MFPSSNYTSSGSYPRFPSSSSSSTSPYPSFTFLHPENSSGSNIFHHDPLAVAYIPSHYHAPIPETLANWAVADCAAMLNQDLGGALSGITKKPAKKTTKKDRHSKIHTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLDWLFTKSKKAIKELTRSKHSVDSFEFSSSSEGEVVSMIHQDLQQQGVDLEERKFKEPSYCVRAKMKESREKARARARERTSSKILSNISSGEGKVQEFKKKCPATENSQILNQLRSPLQPHPQDVGGEVPRDGDLNIIEESIVIKRKLKHTLMSSVHHQNAVIPKEASVNHSDYHSFPNFSPNWEANSGSTGRSTFCAIASMNLSTDQPRACDSWQKRVLRISIVRENRQQYVFLVGHNEQAYVRLGCIKYRRYIHTSD 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3275g00006 402 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 68 331 IPR005333 GO:0003700
Mupr3275g00006 402 ProSiteProfiles R domain profile. 209 226 IPR017888 -
Mupr3275g00006 402 MobiDBLite consensus disorder prediction 1 22 - -
Mupr3275g00006 402 ProSiteProfiles TCP domain profile. 99 157 IPR017887 -
Mupr3275g00006 402 MobiDBLite consensus disorder prediction 92 111 - -
Mupr3275g00006 402 Pfam TCP family transcription factor 97 226 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3275g00006 Mupr-Chr3275 15285 18918 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3275g00006 55 223 TCP Transcription Factor Family AT1G67260 42.021 3.39e-33 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mupr3275g00006 TCP 3.1e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3275g00006 - - gmx:100792572 525.783