Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3275g00005 ATGGCAGCTACGATGGATTTGTACAAGACAGCAGGAGTTCAGTCAGATCCATTCAGAGGTGAGCTTATGGAAGTTCTAGAATCTTTTATGAAAAGTCCTTCCTCAACTCCCTCTATTTCTTCAGATTCAACACTACCTTCTACTTCTACTTCTACTTCTACTTCTTCTACTTCATATTTCTACTCTCCTTCACTCCCTATACAACCAAATTTCTACCCAGACACTTCCTCCTACATATTCCCCACAGGCTTTTCTCCTCAAAGCCAAACACTAATTGGATTTGAGCAACCGAGTTCGCTTCTCGGCCTCAACCACCTAAGCCCGTCTCAGATTACCCAGATCCAGGCCCAGATCCAAGCCCAGAGCCAGACTTCACTCTTCCTCGGCCCGAAGCCTGTTGCCATGAAGCAAGTGGGTGTTCCTCCGAAGCCGACGAAGCTGTACCGCGGGGTGAGGCAGAGGCACTGGGGGAAGTGGGTGGCCGAGATCAGACTCCCGAAGAACCGCACGAGGCTCTGGCTGGGCACCTTCGACACTGCCGAGGAAGCCGCTTTGGCTTACGACAAGGCAGCTTACAGGCTCCGAGGCGACTTCGCCAGACTCAACTTCCCGAACCTCAAAGGTTCCTGCTTCGGCGAGTACAAGGCTACGCAGTCCGCGGTTGACGCCAAACTCGATGCCATCTGTCAGAACCTGGCTGAAATCCAGAAGCAAGGGAAGCCCGACAAAAGTGCGAGGTCAACCAAGAAGCCAAAGCTAGGTCCAAAGGAGGCTCCGAACCCGAACCCGAACCCGAACCCGAACCTGGCTTGCAAGCCTGAATCTTCTGTTGCTCTGTCTCCTATGATGACTGAGAGCGAGGGTTCTGCTGATTCTTCTCCGCTGTCTGATCTTACCTTCGAGTTTACTGAGCCACAATGGGGAGATGCTTCGCCACATCTTAATCTGCAGAAGTTTCCTTCTTATGAGATCGATTGGGATTCTCTCTGA 990 0.5172 MAATMDLYKTAGVQSDPFRGELMEVLESFMKSPSSTPSISSDSTLPSTSTSTSTSSTSYFYSPSLPIQPNFYPDTSSYIFPTGFSPQSQTLIGFEQPSSLLGLNHLSPSQITQIQAQIQAQSQTSLFLGPKPVAMKQVGVPPKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDKAAYRLRGDFARLNFPNLKGSCFGEYKATQSAVDAKLDAICQNLAEIQKQGKPDKSARSTKKPKLGPKEAPNPNPNPNPNLACKPESSVALSPMMTESEGSADSSPLSDLTFEFTEPQWGDASPHLNLQKFPSYEIDWDSL 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3275g00005 329 SMART rav1_2 147 210 IPR001471 GO:0003700|GO:0006355
Mupr3275g00005 329 PRINTS Ethylene responsive element binding protein signature 170 186 IPR001471 GO:0003700|GO:0006355
Mupr3275g00005 329 PRINTS Ethylene responsive element binding protein signature 148 159 IPR001471 GO:0003700|GO:0006355
Mupr3275g00005 329 Gene3D AP2/ERF domain 147 205 IPR036955 GO:0003700|GO:0006355
Mupr3275g00005 329 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 4 329 - -
Mupr3275g00005 329 MobiDBLite consensus disorder prediction 269 300 - -
Mupr3275g00005 329 ProSiteProfiles AP2/ERF domain profile. 147 204 IPR001471 GO:0003700|GO:0006355
Mupr3275g00005 329 MobiDBLite consensus disorder prediction 236 314 - -
Mupr3275g00005 329 MobiDBLite consensus disorder prediction 32 58 - -
Mupr3275g00005 329 MobiDBLite consensus disorder prediction 239 253 - -
Mupr3275g00005 329 FunFam Ethylene-responsive transcription factor 2 146 205 - -
Mupr3275g00005 329 Pfam AP2 domain 148 196 IPR001471 GO:0003700|GO:0006355
Mupr3275g00005 329 SUPERFAMILY DNA-binding domain 147 205 IPR016177 GO:0003677
Mupr3275g00005 329 CDD AP2 146 206 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3275g00005 Mupr-Chr3275 11669 12658 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3275g00005 1 329 AP2-EREBP Transcription Factor Family AT1G78080 49.724 2.61e-88 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr3275g00005 AP2 1.3e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3275g00005 K09286 - gmx:100802961 367.466