LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr3274g00009	ATGGCTCCATCTAAAGTTGATAGTTCAAAGAAGGCTGATCCAAAGGCACAAGCCTTGAAAACTGCTAAGGCAGTTAAGTCAGGCGCTACCTTTAAGAAGAAGGCCAAAAAGATTCGAACATCTGTTACGTTCCATCGACCAAAGACTTTGAAAAAGGATAGGAATCCCAAATACCCGCGCATTAGTGCTACACCGAGGAATAAGCTTGATCACTATCAGCTTTTGAAATATCCTCTCACAACTGAGTCCGCAATGAAGAAGATTGAGGACAATAACACATTGGTTTTCATTGTTGACATACGAGCTGACAAGAAGAAGATCAAGGAAGCAGTGAAGAAGATGTACGATATTCAGGCCAAGAAAGTGAACACCTTGATCAGGCCTGATGGCACCAAGAAGGCCTATGTCAGGTTGACACCAGATTATGACGCCCTGGATGTGGCCAACAAGATTGGAATCATCTAA	465	0.4301	MAPSKVDSSKKADPKAQALKTAKAVKSGATFKKKAKKIRTSVTFHRPKTLKKDRNPKYPRISATPRNKLDHYQLLKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKEAVKKMYDIQAKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII	154

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr3274g00009	154	NCBIfam	50S ribosomal protein L23	78	154	IPR019985	GO:0003735\|GO:0005840\|GO:0006412
	Mupr3274g00009	154	PANTHER	60S RIBOSOMAL PROTEIN L23A	7	154	IPR013025	GO:0003735\|GO:0005840\|GO:0006412
	Mupr3274g00009	154	Hamap	50S ribosomal protein L23 [rplW].	74	154	IPR013025	GO:0003735\|GO:0005840\|GO:0006412
	Mupr3274g00009	154	Pfam	Ribosomal protein L23	75	136	IPR013025	GO:0003735\|GO:0005840\|GO:0006412
	Mupr3274g00009	154	SUPERFAMILY	Ribosomal proteins S24e, L23 and L15e	71	147	IPR012678	GO:0003735\|GO:0005840\|GO:0006412
	Mupr3274g00009	154	ProSitePatterns	Ribosomal protein L23 signature.	132	147	IPR001014	GO:0019843
	Mupr3274g00009	154	FunFam	60S ribosomal protein L23a	34	154	-	-
	Mupr3274g00009	154	Gene3D	-	35	154	IPR012677	-
	Mupr3274g00009	154	Pfam	Ribosomal protein L23, N-terminal domain	15	63	IPR005633	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr3274g00009	Mupr-Chr3274	86599	87980	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr3274g00009	1	154	Cytoplasmic Ribosomal Protein Gene Family	AT2G39460	88.312	2.43e-72	212

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr3274g00009	K02893		-	qsa:O6P43_000250	275.404