Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3265g00004 ATGTCAGGCTTTTCTAGGCAAACTCAGAAACAAGGAATGAAATGTAAGAGAGGAAAAGAGAAAGTTCCAGCCAAAGAAGAAAACATGAACACAGTGAGGAAAGTTAGAATTGTGTTCAATGACCCTGATGCTACAGATTATTCTAGTGAAGATGAAAAGTTTTTGAGCAATGGCCATCAGTTAAAGGGTTGCTCAAAGCGGGTTGTCAATGAAATTTTGCTTCCATGCATGCCAAGCAAATTACATGCAGAGGATTCTTCACAAGAAGATGTCAACAGTGAAAAGATCAAAGCAAGTCCTGGCCCTTTTGCAAGTAGGAGGAACAGGAAATTATCAAGCAACTACAAAGGAGTTCAACGTAGGAAATGGGGAAAATATGTAGCAGAAATTAGAGACCCTAGAGGGGTCAGATTGTGGCTTGGTACTTTTGATACTGAAGAAGAGGCTGCTATGGCTTATGAGAGAAAGAAGAATGAGTTTGAAAGCTCTATGTTGGCTTTGAGCAAAAAGGATGCATTGGCTTGTGAAAATGCCAAAGAGGTATTGTTCCATCCATCTCCATCATCAGTGCTTGATGTCAGCACTACAAAAGCTCCACAAGATGTTAACGACATTGATAGCTCAGTCAAAGAAAAGGTCAATGAGAAAACAGATGGTGCAGGAGGAAGCATTGACATGGAACCAGTTTATAGTGAAGATCATTCAATTCAACATTTGCTGGAGGAGCCAGTTGTGCCATCATTGGATGGTCTCTATTTGGATGAAGTAGAGAAAGGGGCGATGCTGCTTGGTAATGACTTTTATAATTTCTTGGACAATGACATGAAAGGTGATTCTATGTGGAATGTGGAACATAGGGAAGGCACTGTGCTTCCCCTTGTAGACAGTGCTTTTGATGATCTCACTGCTGCCCAGAAATTAGATATTAAGCATATGAGCAAAAAACAACCTTATATAGAAAATGATTAA 969 0.3994 MSGFSRQTQKQGMKCKRGKEKVPAKEENMNTVRKVRIVFNDPDATDYSSEDEKFLSNGHQLKGCSKRVVNEILLPCMPSKLHAEDSSQEDVNSEKIKASPGPFASRRNRKLSSNYKGVQRRKWGKYVAEIRDPRGVRLWLGTFDTEEEAAMAYERKKNEFESSMLALSKKDALACENAKEVLFHPSPSSVLDVSTTKAPQDVNDIDSSVKEKVNEKTDGAGGSIDMEPVYSEDHSIQHLLEEPVVPSLDGLYLDEVEKGAMLLGNDFYNFLDNDMKGDSMWNVEHREGTVLPLVDSAFDDLTAAQKLDIKHMSKKQPYIEND 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3265g00004 322 Gene3D AP2/ERF domain 114 166 IPR036955 GO:0003700|GO:0006355
Mupr3265g00004 322 SUPERFAMILY DNA-binding domain 113 160 IPR016177 GO:0003677
Mupr3265g00004 322 MobiDBLite consensus disorder prediction 83 108 - -
Mupr3265g00004 322 MobiDBLite consensus disorder prediction 13 29 - -
Mupr3265g00004 322 PRINTS Ethylene responsive element binding protein signature 115 126 IPR001471 GO:0003700|GO:0006355
Mupr3265g00004 322 PRINTS Ethylene responsive element binding protein signature 136 152 IPR001471 GO:0003700|GO:0006355
Mupr3265g00004 322 ProSiteProfiles AP2/ERF domain profile. 114 170 IPR001471 GO:0003700|GO:0006355
Mupr3265g00004 322 SMART rav1_2 114 163 IPR001471 GO:0003700|GO:0006355
Mupr3265g00004 322 MobiDBLite consensus disorder prediction 1 29 - -
Mupr3265g00004 322 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 32 163 - -
Mupr3265g00004 322 Pfam AP2 domain 114 161 IPR001471 GO:0003700|GO:0006355
Mupr3265g00004 322 CDD AP2 113 155 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3265g00004 Mupr-Chr3265 21513 23230 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3265g00004 1 179 AP2-EREBP Transcription Factor Family AT1G68550 38.298 3.91e-23 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr3265g00004 AP2 2.9e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3265g00004 - - gmx:102661579 458.373