Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3265g00002 ATGAAAGAAGCAAGTGCATTAGGAGCTAGAACAGCACGAGCATGCGATAACTGCGTAAAAGTAAGAGCACGGTGGTATTGTGCAGCTGATGATGCTTTCCTTTGCCATGGCTGTGACAACATGGTTCACTCAGCAAACCAATTAGCAAGCAGGCACGAAAGGGTTAAGCTTCAATCTGCATCCTCTAAGGTCAACTACTCAGTGACCCCTCATCATAACAATAAGGTATCATGGTACAGTGGATTCACACGCAAGGCAAGAACCCCTCGTCACAACAACAACAAGCACTTATTGGCACAACAACAATCATTACATGAAGAAGAAGAAGAAGAAGAAGGAGCGTTTTTCAATAATTTTATTAGTCTCCCTATTGTGCCAGAGCTTGGAAGTGAAGAACCATCGCTTCATGATGAGACCGAGGAGCAACTGCTGTGTCGCGTGCCCGTGCTTGATGTTGAGCTTTGTAGCATGTACAATGAAGTAAAGGATGAGGTTGTAGCTGGTGAAGAAGCCTTTGACATGGACAACTTTTCTTCCGAGTTTCTCCCATTAGATATGGACCTTGCTGAGTTTGCTGCTGACGTGGAGAGCTTACTTGGAAACGGGGCTGATGAGGATTCATCTGAGCACGTGAAAGAATCAGACCTGCTTCTTGATTGCAAAGAAGAAGAAGATGATGAAATAGATGTATATGTAAATGGACTTGGAGCCAAAGATTCAATGGTTAAGGTTAAAGATGAAGAATCACCTGCACAGGAAGAGGACATGAGTAAAGTGAGAAGCAACAATAAGGGCATTTTTTTGAGGCTAAACTATGAAGATGTCATTACTGCTTGGGCCAGTCAAGGTTCTCCATGGACTACAGTAACCCCACCTGAGTTCAACTCTCATGACTGCTGGCTAGACTTCTTGGGTTCGAGTGGTGGGGATGTTCAATGCTGTTATGGGGAAGTGAGAAGCTTAAGGGGGCTTGGAGATGGGGAAAGAGAAGCAAGAGTGTCAAGGTACCGAGAGAAGAGAAGAACGCGTTTATTTGCAAAGAAGATAAGGTATGAAGTGAGGAAGTTGAACGCGGAGAAAAGACCTAGAATGAAAGGTCGATTTGTGAAGAGGACATCCTTTGTTGGAGCTACTACTGCTTTGCCAGCTTAA 1152 0.4427 MKEASALGARTARACDNCVKVRARWYCAADDAFLCHGCDNMVHSANQLASRHERVKLQSASSKVNYSVTPHHNNKVSWYSGFTRKARTPRHNNNKHLLAQQQSLHEEEEEEEGAFFNNFISLPIVPELGSEEPSLHDETEEQLLCRVPVLDVELCSMYNEVKDEVVAGEEAFDMDNFSSEFLPLDMDLAEFAADVESLLGNGADEDSSEHVKESDLLLDCKEEEDDEIDVYVNGLGAKDSMVKVKDEESPAQEEDMSKVRSNNKGIFLRLNYEDVITAWASQGSPWTTVTPPEFNSHDCWLDFLGSSGGDVQCCYGEVRSLRGLGDGEREARVSRYREKRRTRLFAKKIRYEVRKLNAEKRPRMKGRFVKRTSFVGATTALPA 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3265g00002 383 ProSiteProfiles Zinc finger B-box type profile. 10 57 IPR000315 GO:0008270
Mupr3265g00002 383 ProSiteProfiles CCT domain profile. 329 371 IPR010402 GO:0005515
Mupr3265g00002 383 Pfam B-box zinc finger 12 57 IPR000315 GO:0008270
Mupr3265g00002 383 CDD Bbox1_BBX-like 14 55 - -
Mupr3265g00002 383 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 5 373 - -
Mupr3265g00002 383 Pfam CCT motif 329 371 IPR010402 GO:0005515
Mupr3265g00002 383 SMART bboxneu5 10 57 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3265g00002 Mupr-Chr3265 9400 10965 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3265g00002 4 371 C2C2-CO-like Transcription Factor Family AT1G25440 42.105 1.23e-88 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Mupr3265g00002 zf-B_box 1.4e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3265g00002 - - gmx:100802113 556.214