Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3263g00002 ATGGAGGAGAGGAATGAGATGGATAGGATTGATGAAGTGATGCCTGGCTTTCGTTTTCACCCCACTGATGAAGAGCTTGTTAATTTTTATCTCAAGAGAAAAGTTCAGCAGAAGTCTCTTCCTATTGAACTGATTAAGCAAGTGGATATCTACAAATATGATCCTTGGGACCTTCCAAAGCTGGCGGGTACTGGAGAGAAAGAGTGGTATTTCTACTGTCCAAGGGACAGAAAATACAGGAACAGTGCACGTCCTAATAGAGTCACAAGAGCTGGGTTTTGGAAAGCCACTGGAACTGACAGGCCCATATATTCCTCTGGAGGAAAGTGCATTGGTTTGAAGAAGTCTCTTGTGTTCTACAGAGGAAGAGCTGCCAAAGGGATGAAAACTGACTGGATGATGCATGAGTTTAGGCTTCCTTGCATCTCTGACTCAGCCCCTCCCAAAAAACTCTCAGACAAAACCCTCCCTCCAACTGATTCATGGGCAATTTGTAGGATATTCAAGAAAACCAACTCCCTCTCCATGGCACAGAAAGCCTTATCTCACCCTTGGATCTCTCAGTTACCTGGAAGCATGGTGTCTGACATGTTCACACAGGGTGGAAACTGCCATCAGCTAGGATCACCGTCCATTCAGTTTTGTGGTGACAAGCAAGAGTTACACCAAGTCTCCAACAATGCCATCATCACCAACTTCTCAGCCTCAGATATCCCCACTTACAAACCCATCAACAGCAGCAGCACAGTTTCCAAGCCACCACCAATTCCTGTTTCAGATGGAGACCTTGCTGACAACTTCATATTCTACACAGGGCCCACCAAGTGCACACTTGATGCCAGTTCCATGCTTTCTCTTCCCAACCCTGACTACATAGCATTTGAAGAGCTAAACCAACAGTACAGTGGCTTCTCAATCAATCCACCTCAGGATATGCAACAAAACATGAGCACAGAGGCAGGAACAAAAGAACAAGAGTGGGAAACAGTTGGTAGAACCACTGGATTCCCCTTCAGTTTGCCTCCATATGATGCTTGGAAGGCCTCTTTTGTGGCATGGGACATACCCCCTTGTCCTAGTGATATGCCCACTACCTATTCCACTAGTAAATGCTACACTTAA 1122 0.4572 MEERNEMDRIDEVMPGFRFHPTDEELVNFYLKRKVQQKSLPIELIKQVDIYKYDPWDLPKLAGTGEKEWYFYCPRDRKYRNSARPNRVTRAGFWKATGTDRPIYSSGGKCIGLKKSLVFYRGRAAKGMKTDWMMHEFRLPCISDSAPPKKLSDKTLPPTDSWAICRIFKKTNSLSMAQKALSHPWISQLPGSMVSDMFTQGGNCHQLGSPSIQFCGDKQELHQVSNNAIITNFSASDIPTYKPINSSSTVSKPPPIPVSDGDLADNFIFYTGPTKCTLDASSMLSLPNPDYIAFEELNQQYSGFSINPPQDMQQNMSTEAGTKEQEWETVGRTTGFPFSLPPYDAWKASFVAWDIPPCPSDMPTTYSTSKCYT 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3263g00002 373 Gene3D NAC domain 22 175 IPR036093 GO:0003677|GO:0006355
Mupr3263g00002 373 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
Mupr3263g00002 373 ProSiteProfiles NAC domain profile. 13 170 IPR003441 GO:0003677|GO:0006355
Mupr3263g00002 373 SUPERFAMILY NAC domain 10 170 IPR036093 GO:0003677|GO:0006355
Mupr3263g00002 373 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 12 245 - -
Mupr3263g00002 373 FunFam NAC domain-containing protein 35 22 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3263g00002 Mupr-Chr3263 21025 22988 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3263g00002 2 186 NAC Transcription Factor Family AT5G39820 69.000 1.21e-95 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr3263g00002 NAM 2.5e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3263g00002 - - gmx:100777630 641.728