Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr325g00001 ATGCTCAAGCTGGAATCGTCGAGCTACGTTATTCTGACTATAGACTTTCTTCAATCAATGCAAAGAGGAGATCCATCTTTGATTGGTTACTTCTATGCCTTCTCTATATTTGTTGGAGTGACAGTTGGTGTTCTTTGTGAAGCACAGTATTTCCAGAATGTTATGCGTGTTGGTTTTCGGCTTAGATCAACTTTGGTGGCAGCCATATATAGAAAATCTTTAAGGCTAACTAACGATGGTCGAAAGAAATTCACATCTGGGAAGCTTATGAATATGATAACAACAGATGCCAATGCACTACAGACATTTGTGATTAGCAAAATGCGAAAACTGACAAAGGAAGGACTGCAACAGACAGACAAAAGGGTTGGTCTCATGAATGAAATTCTGTCTGCCATGGATACTGTGAAATGTTATGCATGGGAAACAAGCTTTCAGTCTAGAATTCTAAGCATACGAGATGATGAGCTGACATGGTTCTGCAAAGCCCAGCTGCTATATTCTCTTAACACTTTTATACTAAACAGCATCCCCGTACTTGTGACGGTGACCTCATTTGGAATGTTTACTTTACTGGGTGGAGAATTGACACCTTCAAGGGCATTTACCTCATTATCTCTATTTGCAGTTTTGCGCTTTCCTTTAAATATGCTACCAAACTTACTAAGTCAGGTTGTCATTGTCCCTTGTCACATTCGGTTAACACTTACTTTAGTTGGTGATGTAGCAAATGCAAATGTCTCATTGCAACGTTTGGAGGAACTGTTCTTAGCTGAGGAGCGAAATTTAAAACAAAATCCTCCTATTGAACCAGGACTTCCAGCCATCTCAATTGAGAATGGATACTTTTCATGGGATCCTAAGGAAGAGAAGCCAACATTATCCAATATCAATGTGGAAATACCAGTTGGCAGCTTAATTGCAATCATTGGCAGTACTGGAGAAGGCAAAACATCACTTATTTCAGCAATGATTGGAGAGCTACCTCTTTTAGATGGAAATGCAACAATCAGAGGCACCGTTGCTTATGTTCCTCAGATTTCATGGATTTACAATGCTACAGTTCGTGAAAATATATTATTTGGATCAAAATTTGAATATGAACAATATCAGAAGGTCATCGATATGACTGCTTTACAGCATGATCTCAACTTACTACCGGGACGTGATTTTACAGAGATAGGAGAAAGAGGAATCAATATTAGTGGTGGACAAAAGCAAAGAGTTTCCCTGGCTAGAGCTGTATACTCAAATTCCGATGTATATATATTTGATGATCCTTTGAGTGCTCTTGATGCTCATATTGCTCAAGAGGTTTTCAGGAACTGTATAAAGGAAGGGCTGAGAGGAAAAACCAGGGTTCTTGTCACCAACCAGCTACATTTTCTCCCTCAGGTGGATAAAATCATTCTGGTTAGTGAAGGGATGATTAAAGAGCAGGGAACCTTTGAGGAATTATCAAAAAGTGGGCTTCTATTTCAGAAACTGATGGAAAATGCAGGGAAAATGGAACAACAAGCCGATAATAGCGAAGATAGAGATAGTCATGACAAGGCTAACGGTTTGCCCTTGAATAATGAAGCAATTATGGAATTACCGAGTGATGCAAGCTATGAGAAGAAAGGAAAATTACGAAAATCAGTATTAGTTAAGCAAGAAGAGCGGGAGACAGGCATAGTTAGTTGGAAAGTTATAATGCGGTACAAATCTGCACTTGGAGGACTGTGGGTAGTATCCATACTCTTTGGTTGCTATACATTATCGGAAGTTCTTCGAATTTCAAGTAGCACATGGTTAAGTGTGTGGACATCTCAAGATTCCACTGTAGATTATGATCCGGGATATTTTCTTTCGATCTATGCACTTTTCTCATTTGGACAGGTATGTGTGACACTTGTTAACTCTTATTGGTTGATCATATCAAGTCTCCGTGCTGCCAAAAGATTGCATGATGCAATGCTAGATAAAATCCTCCGGGCTCCTATGGTATTCTTCCAAACTAATCCGGTTGGCCGCATAATTAATAGGTTTTCAAAAGATACAGGAGATATAGATACCAATGTTTTTAATTTGGTGAACATGTTTTTGGGGCAAGTCTGGCAACTACTTTCAACATTTGTTCTTATAGGCACTGTGAGCTCCATATCCCTGTGGGCCATAATGCCACTTCTGCTCTTCTTTTATGCAGCTTATATATATTACCAGAGCACGGCTCGAGAGGTGAAGCGCATGGATTCCATTACAAGATCTCCTGTTTATGCACATTTTGGTGAAGCACTGAATGGTTTGTCAAGCATTCGTGCTTATAAAGCATATGACAGAATGGCACACATCAATGGAAAATTAATGGATAACAACATCAGATTTACTCTTGTGAATATAAGTTCAAACCGTTGGCTCACCATAAGGCTAGAATCATTAGGAGGCCTCATGATTTGGTTGATAGCATCATCTGCTGTCTTGCAGAATGGAAGAGCTGCAAATCAGGCAATGTTTGCATCTACAATGGGTTTACTTCTCAGTTATACTTTGAACATAACAAATCTCTTGAGTGGTGTCCTCAGACAAGCAAGTAGAGCTGAGAACAGTTTAAATGCTGTTGAGCGTGTTGACACGTATATAAACTTAGAATCTGAGGCTCCGGGTATAATTGAGACAAACCGTCCACCACCAGGATGGCCAACCTCAGGATCAATTGAGTTTGAGGATGTTGTTCTTAGATACCGGCCCGAACTTCCTCCGGTGCTGCATGGATTGTCCTTTACAGTACCTCCAACTGAGAAGATAGGGGTGGTTGGAAGAACTGGTGCTGGAAAATCTAGCATGCTTAATGCATTATTCCGGATTGTGGAACTACAAAGAGGAAGAATCATTATCGACGGTTATGACATTTCTACATTTGGAGTAGCAGATCTACGAAAAGTTCTTACTATCATACCACAATCTCCAGTTCTTTTCTCTGGAACTGTTCGTTTCAATCTTGATCCATTTAATGAACACAATGATGCTGACCTATGGGAAGTTTTAGAAAGGGCACATTTGAAGGATGTAGTAAGAAGAAATGCATTTGGTCTAGATGCTCAGGTTTCAGAGGGAGGAGACAATTTCAGTGTTGGACAGAGGCAACTGTTAAGTCTAGCTAGAGCATTGCTACGAAGATCAAAGGTTCTTGTCTTGGATGAAGCTACTGCTGCTGTAGATGTTAGAACTGATTCCCTTATTCAGAAAACTATCAGACAAGAATTTCATTCCTGCACAATGCTCACCATTGCACACAGACTAAATACAATCATTGACTGTAATCGGATTCTTCTGCTCGATGCTGGCCGGGTTCTTGAATACAATACACCAGAGGAACTCTTGCAAAATGAAGGAACTGCTTTCTACAAGATGGTTCAAAGTACTGGAACTGCCAATGCTGAGTATTTATGTAGCCTAGTATTTGGAAGGACAGAGAACAACTCTAATGAATATAACAAGGAGTTGGAAAGGCATATGAGACAATTAGCTTCTACTCATTGGACTTCTGCTACCCAGTTTGCCATAGCTTCTACCCTTTCTTCATTACATCAACACCTTCAAAATCCAAGTAGTGAGGACAATAAAGATTTCCTTGATAAAACAAAGGATGCAGTTACAACACTTCAAGAAGTTCTAGAGGGCAAGCATGATGAAGCCATAGAAGAGACACTGTATAAATACCATGTTCCTACACATAGATGGTGGTCTACTCTCTATAAAGTTGTTGAAGGGCTTCAAGGTCTTGCTGCCTTGGAGAGATTGCCTCTAAACAACATTCAACAACTAGAACTTGATTTTGAAGGGACATCTTTTGAT 3837 0.3982 MLKLESSSYVILTIDFLQSMQRGDPSLIGYFYAFSIFVGVTVGVLCEAQYFQNVMRVGFRLRSTLVAAIYRKSLRLTNDGRKKFTSGKLMNMITTDANALQTFVISKMRKLTKEGLQQTDKRVGLMNEILSAMDTVKCYAWETSFQSRILSIRDDELTWFCKAQLLYSLNTFILNSIPVLVTVTSFGMFTLLGGELTPSRAFTSLSLFAVLRFPLNMLPNLLSQVVIVPCHIRLTLTLVGDVANANVSLQRLEELFLAEERNLKQNPPIEPGLPAISIENGYFSWDPKEEKPTLSNINVEIPVGSLIAIIGSTGEGKTSLISAMIGELPLLDGNATIRGTVAYVPQISWIYNATVRENILFGSKFEYEQYQKVIDMTALQHDLNLLPGRDFTEIGERGINISGGQKQRVSLARAVYSNSDVYIFDDPLSALDAHIAQEVFRNCIKEGLRGKTRVLVTNQLHFLPQVDKIILVSEGMIKEQGTFEELSKSGLLFQKLMENAGKMEQQADNSEDRDSHDKANGLPLNNEAIMELPSDASYEKKGKLRKSVLVKQEERETGIVSWKVIMRYKSALGGLWVVSILFGCYTLSEVLRISSSTWLSVWTSQDSTVDYDPGYFLSIYALFSFGQVCVTLVNSYWLIISSLRAAKRLHDAMLDKILRAPMVFFQTNPVGRIINRFSKDTGDIDTNVFNLVNMFLGQVWQLLSTFVLIGTVSSISLWAIMPLLLFFYAAYIYYQSTAREVKRMDSITRSPVYAHFGEALNGLSSIRAYKAYDRMAHINGKLMDNNIRFTLVNISSNRWLTIRLESLGGLMIWLIASSAVLQNGRAANQAMFASTMGLLLSYTLNITNLLSGVLRQASRAENSLNAVERVDTYINLESEAPGIIETNRPPPGWPTSGSIEFEDVVLRYRPELPPVLHGLSFTVPPTEKIGVVGRTGAGKSSMLNALFRIVELQRGRIIIDGYDISTFGVADLRKVLTIIPQSPVLFSGTVRFNLDPFNEHNDADLWEVLERAHLKDVVRRNAFGLDAQVSEGGDNFSVGQRQLLSLARALLRRSKVLVLDEATAAVDVRTDSLIQKTIRQEFHSCTMLTIAHRLNTIIDCNRILLLDAGRVLEYNTPEELLQNEGTAFYKMVQSTGTANAEYLCSLVFGRTENNSNEYNKELERHMRQLASTHWTSATQFAIASTLSSLHQHLQNPSSEDNKDFLDKTKDAVTTLQEVLEGKHDEAIEETLYKYHVPTHRWWSTLYKVVEGLQGLAALERLPLNNIQQLELDFEGTSFD 1279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr325g00001 1279 ProSitePatterns ABC transporters family signature. 401 415 IPR017871 GO:0005524|GO:0016887
Mupr325g00001 1279 CDD ABC_6TM_ABCC_D2 578 874 IPR044726 GO:0140359
Mupr325g00001 1279 Gene3D - 258 525 IPR027417 -
Mupr325g00001 1279 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 272 498 IPR027417 -
Mupr325g00001 1279 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 11 98 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr325g00001 1279 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 889 1132 IPR027417 -
Mupr325g00001 1279 Gene3D ABC transporter type 1, transmembrane domain 6 103 IPR036640 GO:0005524|GO:0016020
Mupr325g00001 1279 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 16 104 - -
Mupr325g00001 1279 Coils Coil 493 513 - -
Mupr325g00001 1279 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 899 1133 IPR003439 GO:0005524
Mupr325g00001 1279 Pfam ABC transporter 294 428 IPR003439 GO:0005524
Mupr325g00001 1279 CDD ABCC_MRP_domain2 897 1117 - -
Mupr325g00001 1279 SMART AAA_5 925 1118 IPR003593 GO:0016887
Mupr325g00001 1279 SMART AAA_5 303 482 IPR003593 GO:0016887
Mupr325g00001 1279 Gene3D ABC transporter type 1, transmembrane domain 540 880 IPR036640 GO:0005524|GO:0016020
Mupr325g00001 1279 Gene3D ABC transporter type 1, transmembrane domain 104 257 IPR036640 GO:0005524|GO:0016020
Mupr325g00001 1279 SUPERFAMILY ABC transporter transmembrane region 562 879 IPR036640 GO:0005524|GO:0016020
Mupr325g00001 1279 Coils Coil 1148 1168 - -
Mupr325g00001 1279 Pfam ABC transporter 916 1064 IPR003439 GO:0005524
Mupr325g00001 1279 Pfam ABC transporter transmembrane region 580 828 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr325g00001 1279 Pfam ABC transporter transmembrane region 101 215 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr325g00001 1279 FunFam Multidrug resistance-associated protein member 4 883 1135 - -
Mupr325g00001 1279 MobiDBLite consensus disorder prediction 503 522 - -
Mupr325g00001 1279 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 580 862 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr325g00001 1279 SUPERFAMILY ABC transporter transmembrane region 13 414 IPR036640 GO:0005524|GO:0016020
Mupr325g00001 1279 MobiDBLite consensus disorder prediction 505 520 - -
Mupr325g00001 1279 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 99 225 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr325g00001 1279 CDD ABC_6TM_ABCC_D1 14 252 IPR044746 GO:0140359
Mupr325g00001 1279 FunFam ABC transporter C family member 2 542 880 - -
Mupr325g00001 1279 CDD ABCC_MRP_domain1 276 475 - -
Mupr325g00001 1279 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 276 499 IPR003439 GO:0005524
Mupr325g00001 1279 ProSitePatterns ABC transporters family signature. 1036 1050 IPR017871 GO:0005524|GO:0016887
Mupr325g00001 1279 FunFam ABC transporter C family member 2 270 515 - -
Mupr325g00001 1279 Gene3D - 883 1135 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr325g00001 Mupr-Chr325 583 12020 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr325g00001 260 696 Calmodulin-binding Proteins AT2G36910 23.711 1.70e-26 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr325g00001 - - gmx:100811691 2201.79