Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3257g00003 ATGGGGTGTGTGATTAGCAAGGAAGTGTCGAAGGGGATAATCTCTGAGGTGAAGGAGGAGAAGGGTTTGAGTGGTGAGTCTAAAAGGAAGGGTGATGGAGTGTCGGGGAGCAAAGGTGAAGTGGTAGAGGTTCAGAATGGGGAGAAGGAGAAGGAGAAGGAAAAGGAGAAGGAGAATGGTGGTGGTGAAGGGGTGCAGCGGCCTCGTGGCGAGAGGAGGAGATCGAAGGCGAATCCGAGGCTGAGCAATCCGCCCAAGCATTTGCGGGGGGAGCAGGTTGCAGCTGGGTGGCCGCCGTGGCTCACTGCAGTGTGTGGAGAAGCACTCAATGGCTGGATTCCGCGAAAGGCGGACACCTTTGAGAAAATTGATAAGATTGGGCAAGGAACTTATAGTAATGTGTACAAAGCTAAAGACACAATGACGGGTAAAATTGTTGCCCTAAAGAAGGTTCGATTTGACAATTTGGAACCTGAGAGTGTAAAATTCATGGCAAGAGAGATTCTTATTTTGCGAAGGTTGGATCATCCCAATGTTGTAAAGTTGCAAGGGTTAGTTACGTCAAGGATGTCCTGTAGTTTGTATTTGGTGTTTGATTACATGGTGCATGACTTGGCTGGACTTGCTGCAAGCCCAGGAATCAGGTTCACAGAGCCTCAGGTAAAATGTTACATGCATCAGCTGCTATCAGGACTTGAGCACTGTCATAACCGTCATGTACTTCACCGTGATATTAAAGGATCAAATCTTCTTATTGACAATGAAGGAGTACTTAAGATCGCCGACTTTGGACTGGCTTCTATTTTTGATCCAAACCATAAGCATCCGATGACCAGTCGTGTAGTAACCCTTTGGTATCGACCTCCTGAGTTGCTTCTTGGTGCCACAGATTATAGTGTGGGTGTAGACCTCTGGAGTGCCGGATGTATTTTAGGAGAGTTATTGGCTGGGAAGCCAATTATGCCTGGTCGTACAGAGGTGGAGCAACTGCACAAGATATACAAACTATGTGGTTCACCTTCCGATGAGTATTGGAAGAAGTCAAAGTTGCCTAATTCTACCTTGTTTAAACCACGAGAACCATACAAGAGACGCATAAGAGAGACATTTAAAGATTTTCCACCTTCTGCTCTACCCCTCATTGATACACTTCTTGCAATTGATCCTGTAGAACGAAAAACTGCCTCAGATGCTTTAAGAAAACCATATGCTTGCGATCCTTCTAGTCTTCCAAAATATCCTCCAAGCAAGGAAATGGATGCTAAAAGACGGGATGATGAAATGAGGAGACAAAGAGCTGCAGGCAAAGCTCAGGTTGATGGTCCAAAGAAGCATCGTACACGAGATCGTGCTGGAAAAGCTTTTCCTGCTCCTGAAGCCAATGCTGAGCTTCAATCCAATATTGATAGAAGACGTCTAATCACTCATGCAAATGCCAAGAGCAAGAGTGAAAAGTTCCCTCCACCACATCAAGATGGACAACTTGGTTTTCCTTTGGGATCTTCGCATCACATTGATCCAGATACTGTTCCAACTGATGTCTCTTTTACGTCAACCTCATATACCTATTCAAAGGAACCATTCCAAGCCTGGTCTGGTCCCATTGGTAATGCTGCTGACATTGGAGTGCCAAAGCGGAAGAAACACACTGCAGGTGATGCATTGGATTTATCAAAACCACAGAAAAATTCCCTCAAGGACAAGGTTAAGGGAAAGAAAATCATAGCTTAG 1731 0.4535 MGCVISKEVSKGIISEVKEEKGLSGESKRKGDGVSGSKGEVVEVQNGEKEKEKEKEKENGGGEGVQRPRGERRRSKANPRLSNPPKHLRGEQVAAGWPPWLTAVCGEALNGWIPRKADTFEKIDKIGQGTYSNVYKAKDTMTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVVKLQGLVTSRMSCSLYLVFDYMVHDLAGLAASPGIRFTEPQVKCYMHQLLSGLEHCHNRHVLHRDIKGSNLLIDNEGVLKIADFGLASIFDPNHKHPMTSRVVTLWYRPPELLLGATDYSVGVDLWSAGCILGELLAGKPIMPGRTEVEQLHKIYKLCGSPSDEYWKKSKLPNSTLFKPREPYKRRIRETFKDFPPSALPLIDTLLAIDPVERKTASDALRKPYACDPSSLPKYPPSKEMDAKRRDDEMRRQRAAGKAQVDGPKKHRTRDRAGKAFPAPEANAELQSNIDRRRLITHANAKSKSEKFPPPHQDGQLGFPLGSSHHIDPDTVPTDVSFTSTSYTYSKEPFQAWSGPIGNAADIGVPKRKKHTAGDALDLSKPQKNSLKDKVKGKKIIA 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3257g00003 576 Pfam Protein kinase domain 120 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr3257g00003 576 Gene3D Transferase(Phosphotransferase) domain 1 203 438 - -
Mupr3257g00003 576 MobiDBLite consensus disorder prediction 1 93 - -
Mupr3257g00003 576 MobiDBLite consensus disorder prediction 416 451 - -
Mupr3257g00003 576 MobiDBLite consensus disorder prediction 542 576 - -
Mupr3257g00003 576 FunFam probable serine/threonine-protein kinase At1g54610 107 202 - -
Mupr3257g00003 576 MobiDBLite consensus disorder prediction 527 576 - -
Mupr3257g00003 576 MobiDBLite consensus disorder prediction 12 36 - -
Mupr3257g00003 576 CDD STKc_CDK9_like 120 403 - -
Mupr3257g00003 576 PANTHER CELL DIVISION PROTEIN KINASE 118 407 - -
Mupr3257g00003 576 MobiDBLite consensus disorder prediction 43 78 - -
Mupr3257g00003 576 Gene3D Phosphorylase Kinase; domain 1 107 202 - -
Mupr3257g00003 576 ProSitePatterns Serine/Threonine protein kinases active-site signature. 240 252 IPR008271 GO:0004672|GO:0006468
Mupr3257g00003 576 SMART serkin_6 120 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr3257g00003 576 MobiDBLite consensus disorder prediction 398 451 - -
Mupr3257g00003 576 SUPERFAMILY Protein kinase-like (PK-like) 114 404 IPR011009 -
Mupr3257g00003 576 ProSitePatterns Protein kinases ATP-binding region signature. 126 149 IPR017441 GO:0005524
Mupr3257g00003 576 ProSiteProfiles Protein kinase domain profile. 120 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr3257g00003 576 FunFam probable serine/threonine-protein kinase At1g54610 203 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3257g00003 Mupr-Chr3257 33848 38589 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3257g00003 112 438 Core Cell Cycle Gene Families AT5G10270 51.862 2.62e-117 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mupr3257g00003 Pkinase 6.5e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3257g00003 K08819 - gmx:100786837 1065.83