Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3255g00001 ACCTGCAGTTGTGAATCATCTTTTGGCATTTGTCAAATTGAGCTTTTGCTCTTTGTGAAAGAAGAGATCCTTTGTGAAGGGGAAACCTTGGAAAAAAGTCAGAAAAGTCAGTGGCTTATGCCTAGTGAAGGAGGTTATCTGGAGGCTGAAGGAATGGAGAAGACTTGGAGGATCAAACAGGAGGCAATAGCTCGGGAAGTAGATATCTCAAGCTCAAAGAACCAATATGATATTATTTTACCAGAACTTGGTCCATATGCACTGGATTTTACTTCAAGTGGCAGGTATATGGCTGTGGGTGGTCGTAAGGGCCATCTGGGAATTGTGGATATGATAAATCTGAGCCTAATTAAAGAGTTTCAGGTAAGGGAAACAGTGCGGGATGTGGTATTCTTGCATAATGAGCTCTTTTTTGCCACTGCCCAGAAAAAGTATCCATACATCTATAGTCGAGAAGGCACAGAGCTTCACTGCCTCAAGGAACATGGTTCAGTGTTAAGGCTTCAGTTTCTAGAAAACCATTTTCTCTTGGCATCAATCAACAAATCTGGACAACTTCGTTATCAGGATGTTACACTGGGTTCAATGGTCGGTAATTTTCGAACTGGCTTAGGACGTACAAATGTGATGCAAGTGAACCCCTTCAATGGAGTTGTTTCTTTGGGTCACTCAGGTGGTACTGTTACCATGTGGACGCCAACCAGTTCTTCTCCACTTGTCAAGATGCTATGTCATCGTGGGCCTATATCAGCACTGGCATTTCATTCGAATGGCCACTTGATGGCCACTGCTGGGAAAGATAAAAAAGTTAAGCTTTGGGACTTGAGAAAATTTGAGGTTCTTCAAACCTTACCAGGTCATGCAACTACTCTAGATTTTAGTCAAAGAGGCTTGCTTGCTCGTGGTAATGGTTCATCGATTCAGGTTCTGCGTGATGTTCATGGTACACAGAATTATTCTAGGTACATGACTCATTCCATGGTGAAAGGTTACCAGATAGAAAAATTAGCGTTTCGACCATACGAAGATGTTTTAGGTATAGGACATTCCATGGGCTGGTCTAGTATTCTTATCCCAGGAGCAGGAGAACCCAACTTTGACTCGTGGGTTGCAAACCCGTTTGAAACTTCTAAACAGAGGAGAGAAAAAGAAATAAGGTCTCTTCTTGATAAGCTTCCACCTGAGACTATTATGCTAGATCCCAGCAAGATTGGTACAGTGAAACCAACAAAAAAAGAAAAGCCAACAAAGCATGGGAAGGAAGATGAGATAGAAGTTGCCATTGAAGCTACCAAGGGCATAAAACTGAAGAATAAGACAAAAGGAAGAAACAAGCCAGGTAAAAGGATACAGAAAAAGCAAGAGGCAATTGCTAGAGTGAAGAGGCCATACTTGGAGCAGAAGATTCAAGAAGAGGATTTATCAAGAAAAAAGCAGAAAATTAGTGAAGGTATTGAACTACCAAAATCTTTACAGAGGTTTGCCCGGAAAAAAGCATCATCA 1503 0.4158 TCSCESSFGICQIELLLFVKEEILCEGETLEKSQKSQWLMPSEGGYLEAEGMEKTWRIKQEAIAREVDISSSKNQYDIILPELGPYALDFTSSGRYMAVGGRKGHLGIVDMINLSLIKEFQVRETVRDVVFLHNELFFATAQKKYPYIYSREGTELHCLKEHGSVLRLQFLENHFLLASINKSGQLRYQDVTLGSMVGNFRTGLGRTNVMQVNPFNGVVSLGHSGGTVTMWTPTSSSPLVKMLCHRGPISALAFHSNGHLMATAGKDKKVKLWDLRKFEVLQTLPGHATTLDFSQRGLLARGNGSSIQVLRDVHGTQNYSRYMTHSMVKGYQIEKLAFRPYEDVLGIGHSMGWSSILIPGAGEPNFDSWVANPFETSKQRREKEIRSLLDKLPPETIMLDPSKIGTVKPTKKEKPTKHGKEDEIEVAIEATKGIKLKNKTKGRNKPGKRIQKKQEAIARVKRPYLEQKIQEEDLSRKKQKISEGIELPKSLQRFARKKASS 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3255g00001 501 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 242 276 - -
Mupr3255g00001 501 MobiDBLite consensus disorder prediction 406 421 - -
Mupr3255g00001 501 SMART WD40_4 113 150 IPR001680 GO:0005515
Mupr3255g00001 501 SMART WD40_4 235 274 IPR001680 GO:0005515
Mupr3255g00001 501 SMART WD40_4 152 190 IPR001680 GO:0005515
Mupr3255g00001 501 SMART WD40_4 71 110 IPR001680 GO:0005515
Mupr3255g00001 501 Pfam BING4CT (NUC141) domain 322 400 IPR012952 -
Mupr3255g00001 501 MobiDBLite consensus disorder prediction 436 455 - -
Mupr3255g00001 501 SMART BING4CT_2 321 401 IPR012952 -
Mupr3255g00001 501 ProSiteProfiles Trp-Asp (WD) repeats profile. 242 283 IPR001680 GO:0005515
Mupr3255g00001 501 PANTHER WD-REPEAT PROTEIN BING4 28 496 IPR040315 -
Mupr3255g00001 501 Gene3D - 68 356 IPR015943 GO:0005515
Mupr3255g00001 501 SUPERFAMILY WD40 repeat-like 77 349 IPR036322 GO:0005515
Mupr3255g00001 501 FunFam U3 small nucleolar RNA-associated protein 7 74 356 - -
Mupr3255g00001 501 ProSitePatterns Trp-Asp (WD) repeats signature. 261 275 IPR019775 -
Mupr3255g00001 501 MobiDBLite consensus disorder prediction 399 421 - -
Mupr3255g00001 501 Pfam WD domain, G-beta repeat 244 274 IPR001680 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3255g00001 157 309 U-box Gene Family AT2G33340 25.786 8.38e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3255g00001 K14768 - gmx:100802940 835.869