Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3254g00001 ATGGAAGATGATGAGGCATGCATCACGAATCTGAGCCTTGGACTTGGAATGGGAGGGCATGTGCCAAAGAAGAACAATAAGCAGAAAGTGCCTTGCTTGGACCTAACGTTTCAGCTTTGTCCTAAAGGGGAACAAGAAGAAGAAGAAGAAGCCATTGACGTGGATCAACAACATGATATGTCAAAAGGGTTGTGTTTGAAGCACCCAAATGAAGAGAGTCCTGATAGCAACAATAGCAATAACGCCAGCAGAAAGAAACTGAAGCTTACAAAGGAACAATCAGCCACACTTGAGGACATCTTCAAGCTTCACACCACTCTTAACCCCGCACAGAAACAGGCACTTGCTGAGCAATTGAATTTAAAGCATAGACAGGTTGAAGTTTGGTTTCAGAACAGAAGAGCAAGGACCAAGCTGAAACAAACGGAGGTGGATTGCGATTTCCTGAAGAAATGTTGCGAGAAACTAACCGATGAGAACCTAAGGCTGAAGAAGGAACTGCAAGAGCTGCGTGCACAAAAGATTGGACCAACACCACTGTACATTCAACTGCCCAAGGCTACAACCTTAACCATTTGTTCATCGTGCGAGAAACTATTGAAGCCCAATGAAGGGAAGAAAGCAGCCATTTCCGATGTGGTCCGAAACAGCAGCCACAAATTGAAGAGCAGCATAGGGTTAGAGGGTATCTAG 693 0.4488 MEDDEACITNLSLGLGMGGHVPKKNNKQKVPCLDLTFQLCPKGEQEEEEEAIDVDQQHDMSKGLCLKHPNEESPDSNNSNNASRKKLKLTKEQSATLEDIFKLHTTLNPAQKQALAEQLNLKHRQVEVWFQNRRARTKLKQTEVDCDFLKKCCEKLTDENLRLKKELQELRAQKIGPTPLYIQLPKATTLTICSSCEKLLKPNEGKKAAISDVVRNSSHKLKSSIGLEGI 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3254g00001 230 CDD homeodomain 84 141 IPR001356 GO:0003677
Mupr3254g00001 230 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 10 207 - -
Mupr3254g00001 230 ProSiteProfiles 'Homeobox' domain profile. 80 140 IPR001356 GO:0003677
Mupr3254g00001 230 Pfam Homeodomain 84 138 IPR001356 GO:0003677
Mupr3254g00001 230 Coils Coil 146 173 - -
Mupr3254g00001 230 Pfam Homeobox associated leucine zipper 140 173 IPR003106 GO:0006355|GO:0043565
Mupr3254g00001 230 SMART HOX_1 82 144 IPR001356 GO:0003677
Mupr3254g00001 230 ProSitePatterns 'Homeobox' domain signature. 115 138 IPR017970 GO:0000981|GO:0006355
Mupr3254g00001 230 Gene3D - 60 139 - -
Mupr3254g00001 230 SMART halz 140 183 IPR003106 GO:0006355|GO:0043565
Mupr3254g00001 230 MobiDBLite consensus disorder prediction 64 89 - -
Mupr3254g00001 230 SUPERFAMILY Homeodomain-like 70 141 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3254g00001 Mupr-Chr3254 13683 14839 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3254g00001 82 199 Homeobox Transcription Factor Family AT4G37790 73.729 1.39e-54 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mupr3254g00001 Homeodomain 2.4e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3254g00001 - K09338 gmx:100790522 373.629