Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3250g00001 ATGGGTACGTGGGCTGAATTTGATGACGTGGTTGTGTTATTTGTTAACCTTAATTTTAAGGAGATACTTGTGGACTTTGACAAGGGTGTATTCCAGAAAGTTCACGGAGTGCCTTTTTATGAAGGGACAAAGTCAGATCCAGCATTGAATAATGTCTTTAACGAAGCAATGGCTAATCTGGGCACAATCGAGATGAACAAGTTACTTGAAATATATGGAGGATTTGAAGAAATATTGTTGCTAGTTGATGTGGGGGGGTGGCATTGGCCAAAGTTTGAATATGATAATTTCCAAGTATCCTTCTATAAAGGTATCAAATTCCTTGAAGGGATAAAGCAACTTGGAGGAGACATGTTTGAAAGTGTTCCAAAAGGTGATGCTATAATATTGAAGGTAATCGTTGTGGACATCATAGTGCCTGAAGCAATTCACACTACAGAAGCAGATAAAATTTGA 456 0.3794 MGTWAEFDDVVVLFVNLNFKEILVDFDKGVFQKVHGVPFYEGTKSDPALNNVFNEAMANLGTIEMNKLLEIYGGFEEILLLVDVGGWHWPKFEYDNFQVSFYKGIKFLEGIKQLGGDMFESVPKGDAIILKVIVVDIIVPEAIHTTEADKI 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3250g00001 151 Gene3D Vaccinia Virus protein VP39 8 88 IPR029063 -
Mupr3250g00001 151 Pfam O-methyltransferase domain 29 86 IPR001077 GO:0008171
Mupr3250g00001 151 PANTHER O-METHYLTRANSFERASE 25 136 IPR016461 GO:0008168
Mupr3250g00001 151 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 28 137 IPR029063 -
Mupr3250g00001 151 Gene3D Vaccinia Virus protein VP39 108 136 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3250g00001 Mupr-Chr3250 6212 7088 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3250g00001 26 136 Monolignol Biosynthesis Gene Families AT5G54160 42.276 1.04e-19 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3250g00001 - - gmx:100784030 129.798