Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr3244g00001 ATGGCACATCTGGAGGCTTCTCACCCACAAACAGGTGTGGAAGATGGCGATCTGTACACGCAACTATGGAAGTTATGCGCGGGGCCTTTGGTGGATGTCCCTCGCCAAGGGGAAAGAGTTTTCTACTTCCCTCAGGGTCACATGGAACAATTGCAAGCGTCCACTAATCAGGAACTCAACCAGGAATTGACCCAGCAAATTCCTCATTTCAATCTCCCGTCCAAGATTCTCTGCCGCGTTGTGCATATTCAGTTGTTGGCGGAGCAAGAAACCGATGAAGTTTATGCTCGTATCACTTTGCTTCCGGAATCAAATCGAGATGAACCGACGAATCCTGACCCAAGTCTACCCGAGACCCAAAAACAGACGTTTCATTCCTTTAGTAAGATATTAACTGCATCTGATACTAGCACACATGGAGGATTTTCAGTTCTACGGAGACATGCTACCGAGTGTCTGCCACAATTGGACATGACCCAAACTACCCCCACCCAGGAATTGGTAGCAAAGGATCTTCATGGGTTTGAGTGGAAGTTTAAGCATATATTCAGAGGTCAGCCAAGGAGGCACTTGCTCACAACTGGCTGGAGTACATTTGTGACATCCAAAAGACTGGTTGCTGGAGATGCTTTTGTGTTTTTAAGGGGAGAGAATGGCGAACTGCGAGTGGGTGTAAGGCGTGTAGCCCGGCAGCAGAGTCCCATGCCTTCATCTGTGATATCAAGCCAGAGTATGCATCTTGGAGTGCTTGCCACTGCCTCCCATGCAGTTTTGACAAGTACCATGTTTGTGGTCTATTACAAACCGAGGACTAGCCAGTTTATTATTGGTCTAAACAAATATTTGGAGGCAGTCAACAATAAGTTTTCAGTTGGCAAGCGTTTGAAGATGAGATTCGAGGTGGAGGACTCACCCGAGAGAAGATTTTCTGGTACTATTGTTGGGGTTGGGGATGTATCTCCAGGATGGCCGAACTCTCCGTGGCGTTCATTGAAGGTTCAATGGGATGAACCAGCAATAATTCCAAGGCCAGAGAGGGTTTCTTCGTGGGAGATAGAGCCTTTTGTTGCTTCTACTGCTTTGAATGTCACTCAACCGGTGGTGAAGGGCAAAAGGCCCCGGCCTGCTGAGGTTTCATCTTCTGAAATTGCCCCTAATTCCCCTGCTCCAGCATTGTGGTATCATGGACCACATGACCCTACAGCATTAGGTGGCAGTGCAGAGGTCCAAAGCAATGAAAACACAGTTGTATGGTCTTCGAGGCAGAAAGAAATTAATGGCAATCCCATGAATGCTAACAACATGAGCTCAAGAGCCCGTGTGGAAGGAATGTGGCCTTCTTCCCCACATTTGAGTGTGTCTTCAAACCTTTATTCCGACCCCAAAAACAGCAAAGGTGTTGCAGCACAATCATGTGTCTCTGGTTATGCTCCTGTTTCATCTAGGCCGAATGATGATTCGGCACATGATCCCGTGGAATGTGGTAAAAGGAGTGAGAATCCCATGGATTGCTGGATATTTGGAGTTAATTTGACCAACAATTTTATTAATGTTGCCCTTCCGGATAAAGAACTGGGATGTCCACCTATTATTCCTAGTGGTCCCAAAGATTCTATTCCTGTTGCTGCATGTGAAACTGAGGCTGGTCAGAATCCCAATTATTCACTCTCCAATAAGGAGCACAAACAAATTATTTCTGATGAGAGGCACACCAAGCAGCCCACTGTACCATCCACGAGGACTCGGACCAAGGTGCAAATGCAAGGTGTTGCTGTTGGTCGTGCTGTTGACCTTACCGTTTTAAAAGATTATGATGATCTCATAGATGAGCTTGAGAAAATGTTTGATATTAAGGGAGAGCTTCAAATGCAAACCAAATGGGCAATTACTTTTACCGATGATGAAAATGATATGATGCTCGTTGGTGATGATCCATGGCCGGAGTTTTGTACCATGGTGAAGAGGATTTTCATTTGTTCAAAGGAAGATGTGAAGAAGATAAAAAGCAAGCATTGTGCTTCTTCATCAGAGGGTGAAGAGACTTTGTTGAGTCCAGATTCACAGAATATGAATGATGACACTCAGCAAATCTCTTGCGATTTGACAGCTTAA 2112 0.4555 MAHLEASHPQTGVEDGDLYTQLWKLCAGPLVDVPRQGERVFYFPQGHMEQLQASTNQELNQELTQQIPHFNLPSKILCRVVHIQLLAEQETDEVYARITLLPESNRDEPTNPDPSLPETQKQTFHSFSKILTASDTSTHGGFSVLRRHATECLPQLDMTQTTPTQELVAKDLHGFEWKFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRVARQQSPMPSSVISSQSMHLGVLATASHAVLTSTMFVVYYKPRTSQFIIGLNKYLEAVNNKFSVGKRLKMRFEVEDSPERRFSGTIVGVGDVSPGWPNSPWRSLKVQWDEPAIIPRPERVSSWEIEPFVASTALNVTQPVVKGKRPRPAEVSSSEIAPNSPAPALWYHGPHDPTALGGSAEVQSNENTVVWSSRQKEINGNPMNANNMSSRARVEGMWPSSPHLSVSSNLYSDPKNSKGVAAQSCVSGYAPVSSRPNDDSAHDPVECGKRSENPMDCWIFGVNLTNNFINVALPDKELGCPPIIPSGPKDSIPVAACETEAGQNPNYSLSNKEHKQIISDERHTKQPTVPSTRTRTKVQMQGVAVGRAVDLTVLKDYDDLIDELEKMFDIKGELQMQTKWAITFTDDENDMMLVGDDPWPEFCTMVKRIFICSKEDVKKIKSKHCASSSEGEETLLSPDSQNMNDDTQQISCDLTA 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr3244g00001 703 Gene3D - 576 668 - -
Mupr3244g00001 703 Gene3D - 288 360 - -
Mupr3244g00001 703 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 17 668 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mupr3244g00001 703 FunFam Auxin response factor 575 668 - -
Mupr3244g00001 703 Gene3D - 124 228 IPR015300 -
Mupr3244g00001 703 FunFam Auxin response factor 288 359 - -
Mupr3244g00001 703 SUPERFAMILY CAD & PB1 domains 576 656 - -
Mupr3244g00001 703 SMART B3_2 127 229 IPR003340 GO:0003677
Mupr3244g00001 703 FunFam Auxin response factor 125 229 - -
Mupr3244g00001 703 Pfam Auxin response factor 253 332 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mupr3244g00001 703 CDD B3_DNA 125 227 IPR003340 GO:0003677
Mupr3244g00001 703 MobiDBLite consensus disorder prediction 676 703 - -
Mupr3244g00001 703 MobiDBLite consensus disorder prediction 673 703 - -
Mupr3244g00001 703 MobiDBLite consensus disorder prediction 101 121 - -
Mupr3244g00001 703 ProSiteProfiles PB1 domain profile. 580 661 IPR000270 GO:0005515
Mupr3244g00001 703 MobiDBLite consensus disorder prediction 104 121 - -
Mupr3244g00001 703 Pfam B3 DNA binding domain 127 227 IPR003340 GO:0003677
Mupr3244g00001 703 Pfam AUX/IAA family 624 662 IPR033389 -
Mupr3244g00001 703 Pfam AUX/IAA family 567 616 IPR033389 -
Mupr3244g00001 703 ProSiteProfiles B3 DNA-binding domain profile. 127 229 IPR003340 GO:0003677
Mupr3244g00001 703 SUPERFAMILY DNA-binding pseudobarrel domain 115 256 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr3244g00001 Mupr-Chr3244 6119 10109 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr3244g00001 18 667 B3 DNA Binding Superfamily AT4G23980 56.839 0.0 656
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mupr3244g00001 B3 9e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr3244g00001 K14486 - gmx:100820503 1115.91